STRINGSTRING
Psyr_5072 Psyr_5072 Psyr_5074 Psyr_5074 Psyr_5075 Psyr_5075 Psyr_5073 Psyr_5073 folE2 folE2 Psyr_5077 Psyr_5077 rpsN rpsN Psyr_4418 Psyr_4418 Psyr_2128 Psyr_2128 rpmB rpmB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_5072Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K. (323 aa)    
Predicted Functional Partners:
Psyr_5074
Conserved hypothetical protein.
 
  
 0.627
Psyr_5075
Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K.
 
  
0.621
Psyr_5073
Conserved hypothetical protein.
       0.603
folE2
GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
  
 0.496
Psyr_5077
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.491
rpsN
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
 
 0.477
Psyr_4418
Precorrin-6Y C5,15-methyltransferase (decarboxylating).
     
 0.468
Psyr_2128
Protein of unknown function DUF6.
   
   0.431
rpmB
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.413
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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