STRINGSTRING
Psyr_5099 Psyr_5099 Psyr_5100 Psyr_5100 Psyr_2490 Psyr_2490 Psyr_0683 Psyr_0683 Psyr_0853 Psyr_0853 Psyr_0855 Psyr_0855 Psyr_0854 Psyr_0854 Psyr_5098 Psyr_5098 glgA glgA Psyr_2993 Psyr_2993 Psyr_4930 Psyr_4930
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_5099Conserved hypothetical protein. (483 aa)    
Predicted Functional Partners:
Psyr_5100
Conserved hypothetical protein; Belongs to the methyltransferase superfamily.
 
    0.929
Psyr_2490
Trehalose synthase.
   
    0.687
Psyr_0683
NUDIX hydrolase.
  
     0.682
Psyr_0853
Conserved hypothetical protein.
  
     0.654
Psyr_0855
Conserved hypothetical protein.
  
     0.650
Psyr_0854
Conserved hypothetical protein.
  
     0.630
Psyr_5098
Conserved hypothetical protein.
  
    0.606
glgA
Starch (bacterial glycogen) synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.599
Psyr_2993
Maltooligosyl trehalose hydrolase.
   
    0.583
Psyr_4930
Outer membrane porin.
  
     0.582
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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