Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GltB | GltD | Psyr_0411 | Psyr_0412 | Glutamate synthase (NADPH) large subunit. | Glutamate synthase (NADPH) small subunit. | 0.999 |
GltB | Psyr_2273 | Psyr_0411 | Psyr_2273 | Glutamate synthase (NADPH) large subunit. | L-glutamine synthetase. | 0.970 |
GltB | Psyr_3492 | Psyr_0411 | Psyr_3492 | Glutamate synthase (NADPH) large subunit. | L-glutamine synthetase. | 0.970 |
GltB | carB | Psyr_0411 | Psyr_4191 | Glutamate synthase (NADPH) large subunit. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.969 |
GltB | glmS | Psyr_0411 | Psyr_5117 | Glutamate synthase (NADPH) large subunit. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.959 |
GltB | purF | Psyr_0411 | Psyr_1668 | Glutamate synthase (NADPH) large subunit. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.941 |
GltD | GltB | Psyr_0412 | Psyr_0411 | Glutamate synthase (NADPH) small subunit. | Glutamate synthase (NADPH) large subunit. | 0.999 |
GltD | Psyr_2273 | Psyr_0412 | Psyr_2273 | Glutamate synthase (NADPH) small subunit. | L-glutamine synthetase. | 0.915 |
GltD | Psyr_3492 | Psyr_0412 | Psyr_3492 | Glutamate synthase (NADPH) small subunit. | L-glutamine synthetase. | 0.915 |
GltD | carB | Psyr_0412 | Psyr_4191 | Glutamate synthase (NADPH) small subunit. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.916 |
GltD | glmS | Psyr_0412 | Psyr_5117 | Glutamate synthase (NADPH) small subunit. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.918 |
GltD | purF | Psyr_0412 | Psyr_1668 | Glutamate synthase (NADPH) small subunit. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.911 |
Psyr_1052 | Psyr_3302 | Psyr_1052 | Psyr_3302 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | 0.920 |
Psyr_1052 | glmM | Psyr_1052 | Psyr_4185 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.597 |
Psyr_1052 | glmS | Psyr_1052 | Psyr_5117 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.923 |
Psyr_1052 | pgi | Psyr_1052 | Psyr_0826 | Mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP). | Glucose-6-phosphate isomerase. | 0.952 |
Psyr_2273 | GltB | Psyr_2273 | Psyr_0411 | L-glutamine synthetase. | Glutamate synthase (NADPH) large subunit. | 0.970 |
Psyr_2273 | GltD | Psyr_2273 | Psyr_0412 | L-glutamine synthetase. | Glutamate synthase (NADPH) small subunit. | 0.915 |
Psyr_2273 | Psyr_3492 | Psyr_2273 | Psyr_3492 | L-glutamine synthetase. | L-glutamine synthetase. | 0.720 |
Psyr_2273 | carB | Psyr_2273 | Psyr_4191 | L-glutamine synthetase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.921 |
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