Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_1352 | Psyr_2006 | Psyr_1352 | Psyr_2006 | Outer membrane protein (OmpH-like). | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.447 |
Psyr_1352 | Psyr_5128 | Psyr_1352 | Psyr_5128 | Outer membrane protein (OmpH-like). | ATP synthase I chain. | 0.576 |
Psyr_2006 | Psyr_1352 | Psyr_2006 | Psyr_1352 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Outer membrane protein (OmpH-like). | 0.447 |
Psyr_2006 | Psyr_4136 | Psyr_2006 | Psyr_4136 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | BolA-like protein; Belongs to the BolA/IbaG family. | 0.537 |
Psyr_2006 | Psyr_5128 | Psyr_2006 | Psyr_5128 | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | ATP synthase I chain. | 0.598 |
Psyr_4136 | Psyr_2006 | Psyr_4136 | Psyr_2006 | BolA-like protein; Belongs to the BolA/IbaG family. | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.537 |
Psyr_4136 | Psyr_5128 | Psyr_4136 | Psyr_5128 | BolA-like protein; Belongs to the BolA/IbaG family. | ATP synthase I chain. | 0.551 |
Psyr_5128 | Psyr_1352 | Psyr_5128 | Psyr_1352 | ATP synthase I chain. | Outer membrane protein (OmpH-like). | 0.576 |
Psyr_5128 | Psyr_2006 | Psyr_5128 | Psyr_2006 | ATP synthase I chain. | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.598 |
Psyr_5128 | Psyr_4136 | Psyr_5128 | Psyr_4136 | ATP synthase I chain. | BolA-like protein; Belongs to the BolA/IbaG family. | 0.551 |
Psyr_5128 | atpA | Psyr_5128 | Psyr_5123 | ATP synthase I chain. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.639 |
Psyr_5128 | atpB | Psyr_5128 | Psyr_5127 | ATP synthase I chain. | H+-transporting two-sector ATPase, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.972 |
Psyr_5128 | atpE | Psyr_5128 | Psyr_5126 | ATP synthase I chain. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.837 |
Psyr_5128 | atpF | Psyr_5128 | Psyr_5125 | ATP synthase I chain. | ATP synthase F0 subcomplex B subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.639 |
Psyr_5128 | atpG | Psyr_5128 | Psyr_5122 | ATP synthase I chain. | ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.547 |
Psyr_5128 | atpH | Psyr_5128 | Psyr_5124 | ATP synthase I chain. | ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.776 |
Psyr_5128 | rsmG | Psyr_5128 | Psyr_5131 | ATP synthase I chain. | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.559 |
atpA | Psyr_5128 | Psyr_5123 | Psyr_5128 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase I chain. | 0.639 |
atpA | atpB | Psyr_5123 | Psyr_5127 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | H+-transporting two-sector ATPase, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.999 |
atpA | atpE | Psyr_5123 | Psyr_5126 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
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