STRINGSTRING
MGN6.13 MGN6.13 T27C4.14 T27C4.14 F3G5.8 F3G5.8 MTR4 MTR4 3BETAHSD/D1 3BETAHSD/D1 F12L6.24 F12L6.24 F2O15.14 F2O15.14 3BETAHSD/D2 3BETAHSD/D2 MGF10.11 MGF10.11 RRP6L3 RRP6L3 MEE44 MEE44
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGN6.13Nucleotidyltransferase family protein. (530 aa)    
Predicted Functional Partners:
T27C4.14
Exportin-4 protein.
   
  
 0.926
F3G5.8
Ypt/Rab-GAP domain of gyp1p superfamily protein.
      
 0.926
MTR4
DExH-box ATP-dependent RNA helicase DExH9; ATP-dependent RNA helicase that associates with the RNA exosome complex. Required for proper rRNA biogenesis and development. Involved in the 3'-processing of the 7S pre-RNA to the mature 5.8S rRNA and also in the removal of rRNA maturation by-products.
   
 
 0.911
3BETAHSD/D1
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1.
      
 0.824
F12L6.24
Zinc finger C3H1 domain protein.
      
 0.816
F2O15.14
Scarecrow-like transcription factor 11 (SCL11).
   
  
 0.798
3BETAHSD/D2
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2.
      
 0.796
MGF10.11
Zinc finger CCCH domain-containing protein 41.
   
  
 0.792
RRP6L3
Protein RRP6-like 3.
   
 
 0.736
MEE44
Nucleotidyltransferase family protein.
     
0.701
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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