STRINGSTRING
EDM46997.1 EDM46997.1 EDM46866.1 EDM46866.1 EDM46999.1 EDM46999.1 EDM46998.1 EDM46998.1 EDM49737.1 EDM49737.1 EDM49742.1 EDM49742.1 EDM46335.1 EDM46335.1 EDM49867.1 EDM49867.1 EDM48485.1 EDM48485.1 EDM47957.1 EDM47957.1 EDM48828.1 EDM48828.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM46997.1RC220; COG0665 Glycine/D-amino acid oxidases (deaminating). (427 aa)    
Predicted Functional Partners:
EDM46866.1
COG0067 Glutamate synthase domain 1.
  
 
 0.887
EDM46999.1
COG0174 Glutamine synthetase.
 
 
 0.875
EDM46998.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
 
 0.817
EDM49737.1
Sarcosine dehydrogenase; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
  
 0.731
EDM49742.1
COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
 0.731
EDM46335.1
COG2071 Predicted glutamine amidotransferases.
 
  
 0.728
EDM49867.1
COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family.
   
 
  0.728
EDM48485.1
COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.681
EDM47957.1
COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
   
 
 0.675
EDM48828.1
Hypothetical protein.
     
 0.652
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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