Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDB0206402 | DDB_G0294569 | Q54VT9 | Q1ZXN9 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | Rab GTPase. | 0.516 |
DDB0206402 | DDB_G0294577 | Q54VT9 | Q1ZXG2 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | Rab GTPase. | 0.665 |
DDB0206402 | DDB_G0294583 | Q54VT9 | Q86JP0 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | Ras GTPase. | 0.516 |
DDB0206402 | rabggta | Q54VT9 | Q55DQ4 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to proteins with a C-terminal sequence motif -XCC or -XCXC, where both cysteines may become modified. | 0.928 |
DDB0206402 | rabggtb | Q54VT9 | B0G172 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | Probable geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC, -XCXC and -CCXX C-terminal; Belongs to the protein prenyltransferase subunit beta family. | 0.915 |
DDB0206402 | rsmN | Q54VT9 | Q54S63 | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | Small GTPase. | 0.575 |
DDB_G0294569 | DDB0206402 | Q1ZXN9 | Q54VT9 | Rab GTPase. | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | 0.516 |
DDB_G0294569 | DDB_G0294577 | Q1ZXN9 | Q1ZXG2 | Rab GTPase. | Rab GTPase. | 0.412 |
DDB_G0294569 | DDB_G0294583 | Q1ZXN9 | Q86JP0 | Rab GTPase. | Ras GTPase. | 0.463 |
DDB_G0294569 | cog3 | Q1ZXN9 | Q54TT4 | Rab GTPase. | Conserved oligomeric Golgi complex subunit 3; Required for normal Golgi function. | 0.499 |
DDB_G0294569 | cog6 | Q1ZXN9 | Q54CT0 | Rab GTPase. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.499 |
DDB_G0294569 | cog7 | Q1ZXN9 | Q54LC8 | Rab GTPase. | Conserved oligomeric Golgi complex subunit 7; Required for normal Golgi function. | 0.499 |
DDB_G0294569 | rabggta | Q1ZXN9 | Q55DQ4 | Rab GTPase. | Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to proteins with a C-terminal sequence motif -XCC or -XCXC, where both cysteines may become modified. | 0.499 |
DDB_G0294569 | rabggtb | Q1ZXN9 | B0G172 | Rab GTPase. | Probable geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC, -XCXC and -CCXX C-terminal; Belongs to the protein prenyltransferase subunit beta family. | 0.499 |
DDB_G0294569 | rsmN | Q1ZXN9 | Q54S63 | Rab GTPase. | Small GTPase. | 0.555 |
DDB_G0294577 | DDB0206402 | Q1ZXG2 | Q54VT9 | Rab GTPase. | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | 0.665 |
DDB_G0294577 | DDB_G0294569 | Q1ZXG2 | Q1ZXN9 | Rab GTPase. | Rab GTPase. | 0.412 |
DDB_G0294577 | DDB_G0294583 | Q1ZXG2 | Q86JP0 | Rab GTPase. | Ras GTPase. | 0.419 |
DDB_G0294577 | cog3 | Q1ZXG2 | Q54TT4 | Rab GTPase. | Conserved oligomeric Golgi complex subunit 3; Required for normal Golgi function. | 0.522 |
DDB_G0294577 | cog6 | Q1ZXG2 | Q54CT0 | Rab GTPase. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.532 |
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