Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAL24360.1 | SAL35827.1 | AWB69_01770 | AWB69_03375 | EvpB family type VI secretion protein. | Type VI secretion protein. | 0.918 |
SAL24360.1 | SAL35840.1 | AWB69_01770 | AWB69_03377 | EvpB family type VI secretion protein. | TssH-5. | 0.945 |
SAL30163.1 | SAL35840.1 | AWB69_02450 | AWB69_03377 | Chaperone protein DnaJ. | TssH-5. | 0.927 |
SAL30163.1 | clpP | AWB69_02450 | AWB69_07412 | Chaperone protein DnaJ. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.580 |
SAL30163.1 | clpP-2 | AWB69_02450 | AWB69_08991 | Chaperone protein DnaJ. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.580 |
SAL35827.1 | SAL24360.1 | AWB69_03375 | AWB69_01770 | Type VI secretion protein. | EvpB family type VI secretion protein. | 0.918 |
SAL35827.1 | SAL35840.1 | AWB69_03375 | AWB69_03377 | Type VI secretion protein. | TssH-5. | 0.901 |
SAL35827.1 | SAL44715.1 | AWB69_03375 | AWB69_04521 | Type VI secretion protein. | EvpB family type VI secretion protein. | 0.918 |
SAL35827.1 | SAL51600.1 | AWB69_03375 | AWB69_05295 | Type VI secretion protein. | EvpB family type VI secretion protein. | 0.918 |
SAL35840.1 | SAL24360.1 | AWB69_03377 | AWB69_01770 | TssH-5. | EvpB family type VI secretion protein. | 0.945 |
SAL35840.1 | SAL30163.1 | AWB69_03377 | AWB69_02450 | TssH-5. | Chaperone protein DnaJ. | 0.927 |
SAL35840.1 | SAL35827.1 | AWB69_03377 | AWB69_03375 | TssH-5. | Type VI secretion protein. | 0.901 |
SAL35840.1 | SAL44715.1 | AWB69_03377 | AWB69_04521 | TssH-5. | EvpB family type VI secretion protein. | 0.950 |
SAL35840.1 | SAL51600.1 | AWB69_03377 | AWB69_05295 | TssH-5. | EvpB family type VI secretion protein. | 0.945 |
SAL35840.1 | SAL71163.1 | AWB69_03377 | AWB69_08568 | TssH-5. | Molecular chaperone DnaJ. | 0.943 |
SAL35840.1 | clpP | AWB69_03377 | AWB69_07412 | TssH-5. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.953 |
SAL35840.1 | clpP-2 | AWB69_03377 | AWB69_08991 | TssH-5. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.953 |
SAL35840.1 | clpS | AWB69_03377 | AWB69_00191 | TssH-5. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.929 |
SAL35840.1 | dnaJ | AWB69_03377 | AWB69_08856 | TssH-5. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.932 |
SAL44715.1 | SAL35827.1 | AWB69_04521 | AWB69_03375 | EvpB family type VI secretion protein. | Type VI secretion protein. | 0.918 |
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