STRINGSTRING
AGE25437.1 AGE25437.1 AGE25439.1 AGE25439.1 AGE25438.1 AGE25438.1 AGE28137.1 AGE28137.1 AGE25436.1 AGE25436.1 AGE25440.1 AGE25440.1 AGE28139.1 AGE28139.1 AGE25429.1 AGE25429.1 AGE25431.1 AGE25431.1 AGE25432.1 AGE25432.1 AGE25428.1 AGE25428.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE25437.1Type VI secretion lipoprotein TssJ2; COG3521 Uncharacterized protein conserved in bacteria. (153 aa)    
Predicted Functional Partners:
AGE25439.1
Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.970
AGE25438.1
Type VI secretion protein TssK2; COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.965
AGE28137.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.963
AGE25436.1
Type VI secretion protein Fha2; COG3456 Uncharacterized conserved protein, contains FHA domain.
 
  
 0.935
AGE25440.1
Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria.
 
  
 0.929
AGE28139.1
Type VI secretion lipoprotein TssJ1; COG3521 Uncharacterized protein conserved in bacteria.
  
  
 
0.919
AGE25429.1
Type VI secretion protein TssC2; COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.906
AGE25431.1
Type VI secretion protein TssF2; COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.905
AGE25432.1
Type VI secretion protein TssG2; COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.898
AGE25428.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.892
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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