Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PSCI_1906 | PSCI_1912 | PSCI_1906 | PSCI_1912 | Type VI secretion protein. | Type VI secretion protein TssM. | 0.837 |
PSCI_1906 | PSCI_5038 | PSCI_1906 | PSCI_5038 | Type VI secretion protein. | Type VI secretion lipoprotein. | 0.855 |
PSCI_1906 | evpB | PSCI_1906 | PSCI_4586 | Type VI secretion protein. | EvpB family type VI secretion protein. | 0.968 |
PSCI_1906 | fha1 | PSCI_1906 | PSCI_1908 | Type VI secretion protein. | Type VI secretion protein Fha1. | 0.811 |
PSCI_1906 | tagF | PSCI_1906 | PSCI_1913 | Type VI secretion protein. | Type VI secretion-associated protein TagF. | 0.842 |
PSCI_1906 | tssC-2 | PSCI_1906 | PSCI_1905 | Type VI secretion protein. | Type VI secretion system. | 0.991 |
PSCI_1906 | tssE1 | PSCI_1906 | PSCI_1901 | Type VI secretion protein. | Type VI secretion protein TssE1. | 0.932 |
PSCI_1906 | tssJ1 | PSCI_1906 | PSCI_1909 | Type VI secretion protein. | Type VI secretion lipoprotein TssJ1. | 0.860 |
PSCI_1906 | tssK1 | PSCI_1906 | PSCI_1910 | Type VI secretion protein. | Type VI secretion protein TssK1. | 0.890 |
PSCI_1906 | tssL1 | PSCI_1906 | PSCI_1911 | Type VI secretion protein. | Type VI secretion protein TssL1. | 0.937 |
PSCI_1912 | PSCI_1906 | PSCI_1912 | PSCI_1906 | Type VI secretion protein TssM. | Type VI secretion protein. | 0.837 |
PSCI_1912 | PSCI_5038 | PSCI_1912 | PSCI_5038 | Type VI secretion protein TssM. | Type VI secretion lipoprotein. | 0.811 |
PSCI_1912 | evpB | PSCI_1912 | PSCI_4586 | Type VI secretion protein TssM. | EvpB family type VI secretion protein. | 0.853 |
PSCI_1912 | fha1 | PSCI_1912 | PSCI_1908 | Type VI secretion protein TssM. | Type VI secretion protein Fha1. | 0.929 |
PSCI_1912 | tagF | PSCI_1912 | PSCI_1913 | Type VI secretion protein TssM. | Type VI secretion-associated protein TagF. | 0.963 |
PSCI_1912 | tssC-2 | PSCI_1912 | PSCI_1905 | Type VI secretion protein TssM. | Type VI secretion system. | 0.854 |
PSCI_1912 | tssE1 | PSCI_1912 | PSCI_1901 | Type VI secretion protein TssM. | Type VI secretion protein TssE1. | 0.843 |
PSCI_1912 | tssJ1 | PSCI_1912 | PSCI_1909 | Type VI secretion protein TssM. | Type VI secretion lipoprotein TssJ1. | 0.947 |
PSCI_1912 | tssK1 | PSCI_1912 | PSCI_1910 | Type VI secretion protein TssM. | Type VI secretion protein TssK1. | 0.958 |
PSCI_1912 | tssL1 | PSCI_1912 | PSCI_1911 | Type VI secretion protein TssM. | Type VI secretion protein TssL1. | 0.979 |
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