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BPSL1600 BPSL1600 BPSL1603 BPSL1603 BPSL1599 BPSL1599 BPSL1604 BPSL1604 BPSL1606 BPSL1606 BPSL1605 BPSL1605 BPSL3181 BPSL3181 petC petC BPSL1601 BPSL1601 BPSL1602 BPSL1602 BPSL1615 BPSL1615
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
BPSL1600Putative cytochrome c-related lipoprotein; Similar to Xanthomonas axonopodis cytochrome c5 xac0273 SWALL:AAM35165 (EMBL:AE011652) (172 aa) fasta scores: E(): 2.8e-10, 42.85% id in 147 aa, and C-terminal region highly similar to Chlorobium limicola f.sp. thiosulfatophilum cytochrome c-555 SWALL:C555_CHLLT (SWALL:P00123) (86 aa) fasta scores: E(): 3.2e-07, 43.75% id in 80 aa. (164 aa)    
Predicted Functional Partners:
BPSL1603
Putative lipoprotein; Similar to Ralstonia solanacearum probable NosL lipoprotein rsp1373 or rs02085 SWALL:Q8XQB3 (EMBL:AL646084) (176 aa) fasta scores: E(): 3.7e-29, 48.58% id in 177 aa, and to Pseudomonas stutzeri NosL protein precursor SWALL:Q52529 (EMBL:Z69589) (190 aa) fasta scores: E(): 2.6e-13, 36.47% id in 170 aa.
 
     0.829
BPSL1599
Putative membrane linked regulatory protein; Similar to Pseudomonas aeruginosa regulatory protein pa3391 SWALL:NSR1_PSEAE (SWALL:Q9HYL3) (715 aa) fasta scores: E(): 7.3e-71, 39.01% id in 692 aa, and to Pseudomonas stutzeri regulatory protein NosR SWALL:NOSR_PSEST (SWALL:Q00790) (724 aa) fasta scores: E(): 1e-67, 38.32% id in 694 aa.
 
     0.817
BPSL1604
Putative membrane protein; Similar to Ralstonia solanacearum probable NosY transmembrane protein or rsp1372 or rs02086 SWALL:Q8XQB4 (EMBL:AL646084) (274 aa) fasta scores: E(): 9e-58, 62.26% id in 265 aa, and to Pseudomonas stutzeri membrane protein NosY precursor SWALL:NOSY_PSEST (SWALL:P19845) (276 aa) fasta scores: E(): 5.1e-37, 46.88% id in 273 aa.
 
     0.800
BPSL1606
Similar to Ralstonia solanacearum probable copper-binding periplasmic signal peptide protein rsp1370 or rs02088 SWALL:Q8XQB6 (EMBL:AL646084) (423 aa) fasta scores: E(): 2.5e-73, 59.36% id in 406 aa, and to Pseudomonas stutzeri copper-binding periplasmic protein precursor NosD SWALL:NOSD_PSEST (SWALL:P19843) (436 aa) fasta scores: E(): 6.3e-24, 38.71% id in 372 aa.
 
     0.799
BPSL1605
Similar to Ralstonia solanacearum probable copper ATP-binding ABC transporter protein rsp1371 or rs02087 SWALL:Q8XQB5 (EMBL:AL646084) (314 aa) fasta scores: E(): 4.5e-50, 55.77% id in 303 aa, and to Pseudomonas stutzeri copper transport ATP-binding protein NosF SWALL:NOSF_PSEST (SWALL:P19844) (308 aa) fasta scores: E(): 9.8e-35, 43.47% id in 299 aa.
 
     0.778
BPSL3181
Similar to Azotobacter vinelandii cytochrome c4 precursor CycA SWALL:CYC4_AZOVI (SWALL:P43302) (210 aa) fasta scores: E(): 2.4e-25, 45.9% id in 220 aa.
 
   
 0.723
petC
Similar to Rhodospirillum rubrum cytochrome c1 precursor PetC SWALL:CY1_RHORU (SWALL:P23135) (272 aa) fasta scores: E(): 2.5e-07, 32.45% id in 228 aa, and to Ralstonia solanacearum putative cytochrome c1 precursor transmembrane protein PetC or Rsc2927 or Rs00164 SWALL:Q8XVA4 (EMBL:AL646072) (248 aa) fasta scores: E(): 4.8e-67, 65.07% id in 252 aa.
 
  
 0.719
BPSL1601
Hypothetical protein; Very low similarity to Streptomyces coelicolor hypothetical protein sco1549 or scl11.05C SWALL:Q9L1D3 (EMBL:AL157953) (312 aa) fasta scores: E(): 6.6, 31.09% id in 119 aa.
       0.714
BPSL1602
Hypothetical protein; Very low similarity to Streptomyces coelicolor hypothetical protein sco6897 or sc1b2.03 SWALL:Q9KYD3 (EMBL:AL356812) (103 aa) fasta scores: E(): 4.7, 36.48% id in 74 aa.
       0.714
BPSL1615
Putative iron-sulphur protein; No significant database matches to the full length CDS. N-terminus is weakly similar to the N-terminal region of Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 2e-06, 29.46% id in 207 aa.
      
 0.686
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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