STRINGSTRING
APO90698.1 APO90698.1 APO91338.1 APO91338.1 APO90252.1 APO90252.1 APO90295.1 APO90295.1 APO89275.1 APO89275.1 BJD11_23915 BJD11_23915 APO90002.1 APO90002.1 APO92509.1 APO92509.1 APO90190.1 APO90190.1 APO91340.1 APO91340.1 APO89740.1 APO89740.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO90698.1c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)    
Predicted Functional Partners:
APO91338.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.983
APO90252.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
APO90295.1
GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
APO89275.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
BJD11_23915
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
APO90002.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
APO92509.1
Sensor domain-containing diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
APO90190.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.968
APO91340.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.966
APO89740.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.960
Your Current Organism:
Xanthomonas euvesicatoria
NCBI taxonomy Id: 456327
Other names: ATCC 11633, Bacterium vesicatorium, DSM 19128, ICMP 109, ICMP 98, NCPPB 2968, X. euvesicatoria, Xanthomonas campestris (pv. vesicatoria), Xanthomonas campestris pv. Vesicatoria type A, Xanthomonas campestris pv. vesicatoria, Xanthomonas euvesicatoria Jones et al. 2006 emend. Constantin et al. 2016
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