Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KOEU_23130 | algA1 | KOEU_23130 | KOEU_00160 | Cellobiose 2-epimerase. | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.924 |
KOEU_23130 | algA2 | KOEU_23130 | KOEU_20120 | Cellobiose 2-epimerase. | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.924 |
algA1 | KOEU_23130 | KOEU_00160 | KOEU_23130 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Cellobiose 2-epimerase. | 0.924 |
algA1 | algA2 | KOEU_00160 | KOEU_20120 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.918 |
algA1 | algC | KOEU_00160 | KOEU_06180 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Phosphomannomutase/phosphoglucomutase. | 0.974 |
algA1 | glmM1 | KOEU_00160 | KOEU_11120 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Phosphoglucosamine mutase. | 0.975 |
algA1 | mak | KOEU_00160 | KOEU_07140 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Fructokinase. | 0.946 |
algA1 | manX | KOEU_00160 | KOEU_09240 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | PTS system mannose-specific EIIAB component. | 0.921 |
algA1 | nagB | KOEU_00160 | KOEU_10750 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Glucosamine-6-phosphate deaminase 1. | 0.915 |
algA1 | nodM | KOEU_00160 | KOEU_00620 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.921 |
algA1 | tal1 | KOEU_00160 | KOEU_04960 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.951 |
algA1 | tal2 | KOEU_00160 | KOEU_21830 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.951 |
algA2 | KOEU_23130 | KOEU_20120 | KOEU_23130 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Cellobiose 2-epimerase. | 0.924 |
algA2 | algA1 | KOEU_20120 | KOEU_00160 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.918 |
algA2 | algC | KOEU_20120 | KOEU_06180 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Phosphomannomutase/phosphoglucomutase. | 0.976 |
algA2 | glmM1 | KOEU_20120 | KOEU_11120 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Phosphoglucosamine mutase. | 0.977 |
algA2 | mak | KOEU_20120 | KOEU_07140 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Fructokinase. | 0.946 |
algA2 | manX | KOEU_20120 | KOEU_09240 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | PTS system mannose-specific EIIAB component. | 0.921 |
algA2 | nagB | KOEU_20120 | KOEU_10750 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Glucosamine-6-phosphate deaminase 1. | 0.915 |
algA2 | nodM | KOEU_20120 | KOEU_00620 | Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family. | Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.921 |
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