STRINGSTRING
aotJ-1 aotJ-1 aotM-1 aotM-1 aotQ-1 aotQ-1 aotP-1 aotP-1 aotM-2 aotM-2 atoQ-2 atoQ-2 aotP-2 aotP-2 PSEEN0206 PSEEN0206 atoJ-2 atoJ-2 PSEEN5261 PSEEN5261 PSEEN5209 PSEEN5209
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
aotJ-1Arginine/ornithine periplasmic-binding protein AotJ; Function of homologous gene experimentally demonstrated in an other organism; transporter. (248 aa)    
Predicted Functional Partners:
aotM-1
Arginine/ornithine transport membrane protein AotM; Function of strongly homologous gene; transporter.
 
 0.985
aotQ-1
Arginine/ornithine transport protein AotQ (membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.981
aotP-1
Arginine/ornithine transport ATP-binding protein AotP; Function of strongly homologous gene; enzyme.
 
 
 0.975
aotM-2
Arginine/ornithine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.964
atoQ-2
Arginine/ornithine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.960
aotP-2
Arginine/ornithine transport protein AotP; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.952
PSEEN0206
Putative amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.940
atoJ-2
Arginine/ornithine ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
  
 
0.902
PSEEN5261
Putative amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.887
PSEEN5209
Putative amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.886
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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