Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFL51383.1 | AFL51455.1 | USDA257_c28120 | USDA257_c28840 | Hemolysin-type calcium-binding region. | Putative protease. | 0.667 |
AFL51383.1 | aprD2 | USDA257_c28120 | USDA257_c54210 | Hemolysin-type calcium-binding region. | Alkaline protease secretion ATP-binding protein AprD. | 0.655 |
AFL51383.1 | prsE1 | USDA257_c28120 | USDA257_c11010 | Hemolysin-type calcium-binding region. | Type I secretion system membrane fusion protein PrsE. | 0.720 |
AFL51383.1 | prsE2 | USDA257_c28120 | USDA257_c29600 | Hemolysin-type calcium-binding region. | Type I secretion system membrane fusion protein PrsE. | 0.722 |
AFL51383.1 | prsE3 | USDA257_c28120 | USDA257_c54220 | Hemolysin-type calcium-binding region. | Type I secretion system membrane fusion protein PrsE. | 0.704 |
AFL51454.1 | AFL51455.1 | USDA257_c28830 | USDA257_c28840 | Putative protease. | Putative protease. | 0.528 |
AFL51454.1 | aprD2 | USDA257_c28830 | USDA257_c54210 | Putative protease. | Alkaline protease secretion ATP-binding protein AprD. | 0.668 |
AFL51454.1 | prsE1 | USDA257_c28830 | USDA257_c11010 | Putative protease. | Type I secretion system membrane fusion protein PrsE. | 0.735 |
AFL51454.1 | prsE2 | USDA257_c28830 | USDA257_c29600 | Putative protease. | Type I secretion system membrane fusion protein PrsE. | 0.732 |
AFL51454.1 | prsE3 | USDA257_c28830 | USDA257_c54220 | Putative protease. | Type I secretion system membrane fusion protein PrsE. | 0.703 |
AFL51455.1 | AFL51383.1 | USDA257_c28840 | USDA257_c28120 | Putative protease. | Hemolysin-type calcium-binding region. | 0.667 |
AFL51455.1 | AFL51454.1 | USDA257_c28840 | USDA257_c28830 | Putative protease. | Putative protease. | 0.528 |
AFL51455.1 | aprD2 | USDA257_c28840 | USDA257_c54210 | Putative protease. | Alkaline protease secretion ATP-binding protein AprD. | 0.670 |
AFL51455.1 | prsE1 | USDA257_c28840 | USDA257_c11010 | Putative protease. | Type I secretion system membrane fusion protein PrsE. | 0.719 |
AFL51455.1 | prsE2 | USDA257_c28840 | USDA257_c29600 | Putative protease. | Type I secretion system membrane fusion protein PrsE. | 0.709 |
AFL51455.1 | prsE3 | USDA257_c28840 | USDA257_c54220 | Putative protease. | Type I secretion system membrane fusion protein PrsE. | 0.688 |
AFL51778.1 | aprD2 | USDA257_c32100 | USDA257_c54210 | Putative hemolysin-type calcium-binding region, possible nodulation protein O. | Alkaline protease secretion ATP-binding protein AprD. | 0.676 |
AFL51778.1 | prsE1 | USDA257_c32100 | USDA257_c11010 | Putative hemolysin-type calcium-binding region, possible nodulation protein O. | Type I secretion system membrane fusion protein PrsE. | 0.719 |
AFL51778.1 | prsE2 | USDA257_c32100 | USDA257_c29600 | Putative hemolysin-type calcium-binding region, possible nodulation protein O. | Type I secretion system membrane fusion protein PrsE. | 0.722 |
AFL51778.1 | prsE3 | USDA257_c32100 | USDA257_c54220 | Putative hemolysin-type calcium-binding region, possible nodulation protein O. | Type I secretion system membrane fusion protein PrsE. | 0.716 |
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