Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR28346.1 | ACR29413.1 | bglu_1g11780 | bglu_1g23190 | Multi-sensor hybrid histidine kinase. | Transcriptional regulator, LuxR family. | 0.718 |
ACR28346.1 | ACR30404.1 | bglu_1g11780 | bglu_1g33420 | Multi-sensor hybrid histidine kinase. | Signal transduction histidine kinase. | 0.627 |
ACR28346.1 | ACR30650.1 | bglu_1g11780 | bglu_2g01620 | Multi-sensor hybrid histidine kinase. | Two-component system sensor-response regulator hybrid protein. | 0.999 |
ACR28346.1 | ACR31630.1 | bglu_1g11780 | bglu_2g12480 | Multi-sensor hybrid histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.987 |
ACR28346.1 | ACR31806.1 | bglu_1g11780 | bglu_2g14470 | Multi-sensor hybrid histidine kinase. | Quorum sensing LuxR family sensor regulator. | 0.718 |
ACR28346.1 | ACR32275.1 | bglu_1g11780 | bglu_2g19520 | Multi-sensor hybrid histidine kinase. | Two component LuxR family transcriptional regulator. | 0.718 |
ACR28346.1 | ACR32343.1 | bglu_1g11780 | bglu_2g20220 | Multi-sensor hybrid histidine kinase. | Sensory box histidine kinase. | 0.989 |
ACR28346.1 | ACR32375.1 | bglu_1g11780 | bglu_2g20560 | Multi-sensor hybrid histidine kinase. | GAF sensor hybrid histidine kinase. | 0.999 |
ACR29413.1 | ACR28346.1 | bglu_1g23190 | bglu_1g11780 | Transcriptional regulator, LuxR family. | Multi-sensor hybrid histidine kinase. | 0.718 |
ACR29413.1 | ACR30404.1 | bglu_1g23190 | bglu_1g33420 | Transcriptional regulator, LuxR family. | Signal transduction histidine kinase. | 0.546 |
ACR29413.1 | ACR30650.1 | bglu_1g23190 | bglu_2g01620 | Transcriptional regulator, LuxR family. | Two-component system sensor-response regulator hybrid protein. | 0.763 |
ACR29413.1 | ACR31630.1 | bglu_1g23190 | bglu_2g12480 | Transcriptional regulator, LuxR family. | Multi-sensor signal transduction histidine kinase. | 0.583 |
ACR29413.1 | ACR31806.1 | bglu_1g23190 | bglu_2g14470 | Transcriptional regulator, LuxR family. | Quorum sensing LuxR family sensor regulator. | 0.939 |
ACR29413.1 | ACR31808.1 | bglu_1g23190 | bglu_2g14490 | Transcriptional regulator, LuxR family. | Quorum sensing autoinducer synthase. | 0.933 |
ACR29413.1 | ACR32275.1 | bglu_1g23190 | bglu_2g19520 | Transcriptional regulator, LuxR family. | Two component LuxR family transcriptional regulator. | 0.619 |
ACR29413.1 | ACR32343.1 | bglu_1g23190 | bglu_2g20220 | Transcriptional regulator, LuxR family. | Sensory box histidine kinase. | 0.609 |
ACR29413.1 | ACR32375.1 | bglu_1g23190 | bglu_2g20560 | Transcriptional regulator, LuxR family. | GAF sensor hybrid histidine kinase. | 0.721 |
ACR30404.1 | ACR28346.1 | bglu_1g33420 | bglu_1g11780 | Signal transduction histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.627 |
ACR30404.1 | ACR29413.1 | bglu_1g33420 | bglu_1g23190 | Signal transduction histidine kinase. | Transcriptional regulator, LuxR family. | 0.546 |
ACR30404.1 | ACR31806.1 | bglu_1g33420 | bglu_2g14470 | Signal transduction histidine kinase. | Quorum sensing LuxR family sensor regulator. | 0.678 |
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