Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAL09769.1 | SAL11884.1 | AWB69_00084 | AWB69_00321 | PF04357 family protein. | Porin. | 0.602 |
SAL09769.1 | SAL31033.1 | AWB69_00084 | AWB69_02576 | PF04357 family protein. | Porin. | 0.478 |
SAL09769.1 | SAL39947.1 | AWB69_00084 | AWB69_04000 | PF04357 family protein. | Hypothetical protein. | 0.401 |
SAL09769.1 | SAL43043.1 | AWB69_00084 | AWB69_04346 | PF04357 family protein. | Trimeric autotransporter adhesin, BpaC. | 0.557 |
SAL09769.1 | SAL72371.1 | AWB69_00084 | AWB69_08795 | PF04357 family protein. | Porin. | 0.566 |
SAL11884.1 | SAL09769.1 | AWB69_00321 | AWB69_00084 | Porin. | PF04357 family protein. | 0.602 |
SAL11884.1 | SAL20066.1 | AWB69_00321 | AWB69_01291 | Porin. | Porin protein. | 0.895 |
SAL11884.1 | SAL31033.1 | AWB69_00321 | AWB69_02576 | Porin. | Porin. | 0.889 |
SAL11884.1 | SAL34874.1 | AWB69_00321 | AWB69_03214 | Porin. | Outer membrane porin lipoprotein. | 0.750 |
SAL11884.1 | SAL40604.1 | AWB69_00321 | AWB69_04088 | Porin. | Membrane protein SmpA. | 0.724 |
SAL11884.1 | SAL43043.1 | AWB69_00321 | AWB69_04346 | Porin. | Trimeric autotransporter adhesin, BpaC. | 0.523 |
SAL11884.1 | SAL51847.1 | AWB69_00321 | AWB69_05336 | Porin. | Outer membrane protein (porin). | 0.795 |
SAL11884.1 | SAL60201.1 | AWB69_00321 | AWB69_06665 | Porin. | Porin. | 0.903 |
SAL11884.1 | SAL72371.1 | AWB69_00321 | AWB69_08795 | Porin. | Porin. | 0.871 |
SAL20066.1 | SAL11884.1 | AWB69_01291 | AWB69_00321 | Porin protein. | Porin. | 0.895 |
SAL20066.1 | SAL34874.1 | AWB69_01291 | AWB69_03214 | Porin protein. | Outer membrane porin lipoprotein. | 0.769 |
SAL20066.1 | SAL39947.1 | AWB69_01291 | AWB69_04000 | Porin protein. | Hypothetical protein. | 0.473 |
SAL20066.1 | SAL40604.1 | AWB69_01291 | AWB69_04088 | Porin protein. | Membrane protein SmpA. | 0.755 |
SAL20066.1 | SAL43043.1 | AWB69_01291 | AWB69_04346 | Porin protein. | Trimeric autotransporter adhesin, BpaC. | 0.502 |
SAL20066.1 | SAL51847.1 | AWB69_01291 | AWB69_05336 | Porin protein. | Outer membrane protein (porin). | 0.774 |
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