STRINGSTRING
Cgl0009 Cgl0009 Cgl0008 Cgl0008 int2-2 int2-2 Cgl0011 Cgl0011 Cgl0012 Cgl0012 gyrA gyrA Cgl0014 Cgl0014 Cgl1634 Cgl1634 Cgl0010 Cgl0010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0009Conserved hypothetical protein. (147 aa)    
Predicted Functional Partners:
Cgl0008
UNCHARACTERIZED MEMBRANE PROTEIN.
       0.797
int2-2
Putative phage Integrase (N-terminal fragment); Belongs to the 'phage' integrase family.
   
  
 0.701
Cgl0011
Bacterial regulatory proteins, tetR family.
       0.536
Cgl0012
Helix-turn-helix protein, copG family.
       0.536
gyrA
DNA TOPOISOMERASE (ATP-HYDROLYSING); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent [...]
  
    0.492
Cgl0014
PUTATIVE INTEGRAL MEMBRANE PROTEIN.
       0.488
Cgl1634
Conserved hypothetical protein.
  
     0.469
Cgl0010
PUTATIVE TRANSCRIPTION REGULATOR PROTEIN.
       0.450
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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