STRINGSTRING
Cgl0014 Cgl0014 gyrA gyrA Cgl2179 Cgl2179 ribX ribX Cgl0888 Cgl0888 Cgl2949 Cgl2949 Cgl1961 Cgl1961 Cgl0853 Cgl0853 Cgl0011 Cgl0011 Cgl0012 Cgl0012 Cgl2987 Cgl2987
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0014PUTATIVE INTEGRAL MEMBRANE PROTEIN. (114 aa)    
Predicted Functional Partners:
gyrA
DNA TOPOISOMERASE (ATP-HYDROLYSING); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent [...]
  
  
 0.916
Cgl2179
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.765
ribX
Putative membrane protein-C. ammoniagenes RibX homolog.
  
    0.742
Cgl0888
Putative membrane protein.
  
    0.725
Cgl2949
Conserved hypothetical protein.
 
    0.721
Cgl1961
Similar to phage shock protein A.
 
    0.710
Cgl0853
Putative chorismate mutase.
  
    0.704
Cgl0011
Bacterial regulatory proteins, tetR family.
       0.685
Cgl0012
Helix-turn-helix protein, copG family.
       0.685
Cgl2987
Conserved hypothetical protein.
  
    0.672
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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