Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0052 | Cgl0053 | cg0071 | cg0072 | Metallo-beta-lactamase superfamily. | Conserved hypothetical membrane protein. | 0.837 |
Cgl0052 | Cgl0055 | cg0071 | cg0074 | Metallo-beta-lactamase superfamily. | Sulfurtransferase. | 0.894 |
Cgl0052 | Cgl1310 | cg0071 | cg1482 | Metallo-beta-lactamase superfamily. | Zn-dependent hydrolases, including glyoxylases. | 0.961 |
Cgl0052 | Cgl1311 | cg0071 | cg1483 | Metallo-beta-lactamase superfamily. | Putative membrane protein. | 0.641 |
Cgl0052 | rplQ | cg0071 | cg0656 | Metallo-beta-lactamase superfamily. | 50S RIBOSOMAL PROTEIN L17. | 0.493 |
Cgl0052 | rpsQ | cg0071 | cg0604 | Metallo-beta-lactamase superfamily. | 30S RIBOSOMAL PROTEIN S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.825 |
Cgl0052 | sod | cg0071 | cg3237 | Metallo-beta-lactamase superfamily. | MANGANESE SUPEROXIDE DISMUTASE; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.664 |
Cgl0052 | ybeY | cg0071 | cg2512 | Metallo-beta-lactamase superfamily. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.966 |
Cgl0053 | Cgl0052 | cg0072 | cg0071 | Conserved hypothetical membrane protein. | Metallo-beta-lactamase superfamily. | 0.837 |
Cgl0053 | Cgl0054 | cg0072 | cg0073 | Conserved hypothetical membrane protein. | Sulfurtransferase. | 0.782 |
Cgl0053 | Cgl0055 | cg0072 | cg0074 | Conserved hypothetical membrane protein. | Sulfurtransferase. | 0.935 |
Cgl0053 | Cgl0056 | cg0072 | cg0075 | Conserved hypothetical membrane protein. | Conserved hypothetical protein. | 0.678 |
Cgl0053 | Cgl1310 | cg0072 | cg1482 | Conserved hypothetical membrane protein. | Zn-dependent hydrolases, including glyoxylases. | 0.747 |
Cgl0054 | Cgl0053 | cg0073 | cg0072 | Sulfurtransferase. | Conserved hypothetical membrane protein. | 0.782 |
Cgl0054 | Cgl0055 | cg0073 | cg0074 | Sulfurtransferase. | Sulfurtransferase. | 0.827 |
Cgl0054 | Cgl0056 | cg0073 | cg0075 | Sulfurtransferase. | Conserved hypothetical protein. | 0.578 |
Cgl0054 | rplQ | cg0073 | cg0656 | Sulfurtransferase. | 50S RIBOSOMAL PROTEIN L17. | 0.476 |
Cgl0054 | rpsQ | cg0073 | cg0604 | Sulfurtransferase. | 30S RIBOSOMAL PROTEIN S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.533 |
Cgl0054 | sod | cg0073 | cg3237 | Sulfurtransferase. | MANGANESE SUPEROXIDE DISMUTASE; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.586 |
Cgl0054 | ybeY | cg0073 | cg2512 | Sulfurtransferase. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.555 |
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