Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0066 | citP | cg0087 | cg0088 | Probable transmembrane transport protein. | Citrate transporter. | 0.553 |
Cgl0552 | citP | cg0644 | cg0088 | Pyruvate phosphate dikinase, PEP/pyruvate binding. | Citrate transporter. | 0.465 |
citA | citB | cg0089 | cg0090 | SENSORY HISTIDINE KINASE IN TWO-COMPONENT RETGULAT. | TWO-COMPONENT RESPONSE REGULATOR CitB. | 0.997 |
citA | citP | cg0089 | cg0088 | SENSORY HISTIDINE KINASE IN TWO-COMPONENT RETGULAT. | Citrate transporter. | 0.856 |
citB | citA | cg0090 | cg0089 | TWO-COMPONENT RESPONSE REGULATOR CitB. | SENSORY HISTIDINE KINASE IN TWO-COMPONENT RETGULAT. | 0.997 |
citB | citP | cg0090 | cg0088 | TWO-COMPONENT RESPONSE REGULATOR CitB. | Citrate transporter. | 0.761 |
citP | Cgl0066 | cg0088 | cg0087 | Citrate transporter. | Probable transmembrane transport protein. | 0.553 |
citP | Cgl0552 | cg0088 | cg0644 | Citrate transporter. | Pyruvate phosphate dikinase, PEP/pyruvate binding. | 0.465 |
citP | citA | cg0088 | cg0089 | Citrate transporter. | SENSORY HISTIDINE KINASE IN TWO-COMPONENT RETGULAT. | 0.856 |
citP | citB | cg0088 | cg0090 | Citrate transporter. | TWO-COMPONENT RESPONSE REGULATOR CitB. | 0.761 |
citP | dctM | cg0088 | cg2568 | Citrate transporter. | PUTATIVE C4-DICARBOXYLATE TRANSPORT SYSTEM (PERMEASE LARGE PROTEIN). | 0.532 |
dctM | citP | cg2568 | cg0088 | PUTATIVE C4-DICARBOXYLATE TRANSPORT SYSTEM (PERMEASE LARGE PROTEIN). | Citrate transporter. | 0.532 |