Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0105 | Cgl0106 | cg0138 | cg0139 | ATP/GTP-binding protein. | Bacterial regulatory proteins, deoR family. | 0.404 |
Cgl0106 | Cgl0105 | cg0139 | cg0138 | Bacterial regulatory proteins, deoR family. | ATP/GTP-binding protein. | 0.404 |
Cgl0106 | Cgl1932 | cg0139 | cg2116 | Bacterial regulatory proteins, deoR family. | PUTATIVE PHOSPHOFRUCTOKINASE. | 0.603 |
Cgl0106 | glpD | cg0139 | cg1853 | Bacterial regulatory proteins, deoR family. | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | 0.432 |
Cgl0106 | pfkB | cg0139 | cg2119 | Bacterial regulatory proteins, deoR family. | 1-PHOSPHOFRUCTOKINASE PROTEIN; Belongs to the carbohydrate kinase PfkB family. | 0.802 |
Cgl0106 | ptsF | cg0139 | cg2120 | Bacterial regulatory proteins, deoR family. | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | 0.882 |
Cgl0106 | ptsS | cg0139 | cg2925 | Bacterial regulatory proteins, deoR family. | ENZYME II SUCROSE PROTEIN. | 0.475 |
Cgl0106 | rmpA | cg0139 | cg3366 | Bacterial regulatory proteins, deoR family. | Putative ribitol-specific enzyme II of PTS system. | 0.457 |
Cgl1932 | Cgl0106 | cg2116 | cg0139 | PUTATIVE PHOSPHOFRUCTOKINASE. | Bacterial regulatory proteins, deoR family. | 0.603 |
Cgl1932 | pfkB | cg2116 | cg2119 | PUTATIVE PHOSPHOFRUCTOKINASE. | 1-PHOSPHOFRUCTOKINASE PROTEIN; Belongs to the carbohydrate kinase PfkB family. | 0.925 |
Cgl1932 | ptsF | cg2116 | cg2120 | PUTATIVE PHOSPHOFRUCTOKINASE. | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | 0.999 |
Cgl1932 | ptsS | cg2116 | cg2925 | PUTATIVE PHOSPHOFRUCTOKINASE. | ENZYME II SUCROSE PROTEIN. | 0.587 |
Cgl1932 | rmpA | cg2116 | cg3366 | PUTATIVE PHOSPHOFRUCTOKINASE. | Putative ribitol-specific enzyme II of PTS system. | 0.779 |
glpD | Cgl0106 | cg1853 | cg0139 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | Bacterial regulatory proteins, deoR family. | 0.432 |
glpD | ptsF | cg1853 | cg2120 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | 0.530 |
glpD | ptsS | cg1853 | cg2925 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | ENZYME II SUCROSE PROTEIN. | 0.425 |
pfkB | Cgl0106 | cg2119 | cg0139 | 1-PHOSPHOFRUCTOKINASE PROTEIN; Belongs to the carbohydrate kinase PfkB family. | Bacterial regulatory proteins, deoR family. | 0.802 |
pfkB | Cgl1932 | cg2119 | cg2116 | 1-PHOSPHOFRUCTOKINASE PROTEIN; Belongs to the carbohydrate kinase PfkB family. | PUTATIVE PHOSPHOFRUCTOKINASE. | 0.925 |
pfkB | ptsF | cg2119 | cg2120 | 1-PHOSPHOFRUCTOKINASE PROTEIN; Belongs to the carbohydrate kinase PfkB family. | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | 0.999 |
pfkB | ptsS | cg2119 | cg2925 | 1-PHOSPHOFRUCTOKINASE PROTEIN; Belongs to the carbohydrate kinase PfkB family. | ENZYME II SUCROSE PROTEIN. | 0.885 |
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