Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0111 | glpD | cg0146 | cg1853 | Bacterial regulatory proteins, deoR family. | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | 0.437 |
Cgl0111 | mtlD | cg0146 | cg0143 | Bacterial regulatory proteins, deoR family. | MANNITOL 2-DEHYDROGENASE. | 0.550 |
Cgl0111 | ptsF | cg0146 | cg2120 | Bacterial regulatory proteins, deoR family. | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | 0.842 |
Cgl0111 | rbtT | cg0146 | cg0144 | Bacterial regulatory proteins, deoR family. | PUTATIVE RIBITOL TRANSPORTER. | 0.676 |
Cgl0111 | xylB | cg0146 | cg0147 | Bacterial regulatory proteins, deoR family. | XYLULOSE KINASE. | 0.874 |
glpD | Cgl0111 | cg1853 | cg0146 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | Bacterial regulatory proteins, deoR family. | 0.437 |
glpD | ptsF | cg1853 | cg2120 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | 0.530 |
glpD | rpe | cg1853 | cg1801 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | RIBULOSE-5-PHOSPHATE-3-EPIMERASE; Belongs to the ribulose-phosphate 3-epimerase family. | 0.438 |
glpD | xylB | cg1853 | cg0147 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | XYLULOSE KINASE. | 0.747 |
iolG | xylB | cg0204 | cg0147 | PUTATIVE OXIDOREDUCTASE MYO-INOSITOL 2-DEHYDROGENA; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). | XYLULOSE KINASE. | 0.648 |
iolG | xylC | cg0204 | cg2953 | PUTATIVE OXIDOREDUCTASE MYO-INOSITOL 2-DEHYDROGENA; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). | BENZALDEHYDE DEHYDROGENASE; Belongs to the aldehyde dehydrogenase family. | 0.518 |
mtlD | Cgl0111 | cg0143 | cg0146 | MANNITOL 2-DEHYDROGENASE. | Bacterial regulatory proteins, deoR family. | 0.550 |
mtlD | ptsF | cg0143 | cg2120 | MANNITOL 2-DEHYDROGENASE. | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | 0.973 |
mtlD | rbtT | cg0143 | cg0144 | MANNITOL 2-DEHYDROGENASE. | PUTATIVE RIBITOL TRANSPORTER. | 0.991 |
mtlD | sixA | cg0143 | cg0142 | MANNITOL 2-DEHYDROGENASE. | PHOSPHOHISTIDINE PHOSPHATASE. | 0.965 |
mtlD | xylB | cg0143 | cg0147 | MANNITOL 2-DEHYDROGENASE. | XYLULOSE KINASE. | 0.770 |
mtlD | xylC | cg0143 | cg2953 | MANNITOL 2-DEHYDROGENASE. | BENZALDEHYDE DEHYDROGENASE; Belongs to the aldehyde dehydrogenase family. | 0.472 |
ptsF | Cgl0111 | cg2120 | cg0146 | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | Bacterial regulatory proteins, deoR family. | 0.842 |
ptsF | glpD | cg2120 | cg1853 | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | GLYCEROL-3-PHOSPHATE DEHYDROGENASE. | 0.530 |
ptsF | mtlD | cg2120 | cg0143 | SUGAR SPECIFIC PTS SYSTEM, FRUCTOSE/MANNITOL-SPECIFIC TRANSPORT PROTEIN. | MANNITOL 2-DEHYDROGENASE. | 0.973 |
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