Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0119 | Cgl0120 | cg0154 | cg0155 | Haloacid dehalogenase-like hydrolase. | PUTATIVE ACETYLTRANSFERASE. | 0.996 |
Cgl0119 | hde | cg0154 | cg0153 | Haloacid dehalogenase-like hydrolase. | PROBABLE ESTERASE/LIPASE PROTEIN. | 0.653 |
Cgl0120 | Cgl0119 | cg0155 | cg0154 | PUTATIVE ACETYLTRANSFERASE. | Haloacid dehalogenase-like hydrolase. | 0.996 |
Cgl0120 | hde | cg0155 | cg0153 | PUTATIVE ACETYLTRANSFERASE. | PROBABLE ESTERASE/LIPASE PROTEIN. | 0.550 |
Cgl0629 | acpM | cg0727 | cg2473 | Nucleoside-diphosphate-sugar epimerase. | ACYL CARRIER PROTEIN (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.698 |
Cgl0629 | hde | cg0727 | cg0153 | Nucleoside-diphosphate-sugar epimerase. | PROBABLE ESTERASE/LIPASE PROTEIN. | 0.464 |
Cgl0629 | pks | cg0727 | cg3178 | Nucleoside-diphosphate-sugar epimerase. | POLYKETIDE SYNTHASE. | 0.769 |
Cgl0629 | qcrA1 | cg0727 | cg2404 | Nucleoside-diphosphate-sugar epimerase. | RIESKE IRON-SULFUR PROTEIN; Iron-sulfur subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.766 |
Cgl1050 | acpM | cg1194 | cg2473 | Short chain dehydrogenase. | ACYL CARRIER PROTEIN (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.697 |
Cgl1050 | hde | cg1194 | cg0153 | Short chain dehydrogenase. | PROBABLE ESTERASE/LIPASE PROTEIN. | 0.467 |
Cgl1050 | pks | cg1194 | cg3178 | Short chain dehydrogenase. | POLYKETIDE SYNTHASE. | 0.769 |
Cgl1050 | qcrA1 | cg1194 | cg2404 | Short chain dehydrogenase. | RIESKE IRON-SULFUR PROTEIN; Iron-sulfur subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.766 |
Cgl1249 | acpM | cg1408 | cg2473 | Putative membrane protein. | ACYL CARRIER PROTEIN (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.700 |
Cgl1249 | hde | cg1408 | cg0153 | Putative membrane protein. | PROBABLE ESTERASE/LIPASE PROTEIN. | 0.464 |
Cgl1249 | pks | cg1408 | cg3178 | Putative membrane protein. | POLYKETIDE SYNTHASE. | 0.770 |
Cgl1249 | qcrA1 | cg1408 | cg2404 | Putative membrane protein. | RIESKE IRON-SULFUR PROTEIN; Iron-sulfur subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.766 |
Cgl2302 | hde | cg2528 | cg0153 | TYPE-B CARBOXYLESTERASE/LIPASE FAMILY; Belongs to the type-B carboxylesterase/lipase family. | PROBABLE ESTERASE/LIPASE PROTEIN. | 0.527 |
Cgl2381 | hde | cg2614 | cg0153 | Bacterial regulatory proteins, TetR family. | PROBABLE ESTERASE/LIPASE PROTEIN. | 0.542 |
acpM | Cgl0629 | cg2473 | cg0727 | ACYL CARRIER PROTEIN (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Nucleoside-diphosphate-sugar epimerase. | 0.698 |
acpM | Cgl1050 | cg2473 | cg1194 | ACYL CARRIER PROTEIN (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Short chain dehydrogenase. | 0.697 |
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