STRINGSTRING
Cgl0123 Cgl0123 Cgl0124 Cgl0124 pcaR pcaR Cgl0122 Cgl0122 Cgl0121 Cgl0121 dtxR dtxR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0123Hypothetical protein predicted by Glimmer/Critica. (172 aa)    
Predicted Functional Partners:
Cgl0124
Hypothetical protein.
 
  
 0.997
pcaR
Bacterial regulatory proteins, IclR family.
      
 0.981
Cgl0122
PUTATIVE MEMBRANE TRANSPORT PROTEIN.
       0.671
Cgl0121
Bacterial regulatory proteins, Crp family.
       0.467
dtxR
IRON DEPENDENT REGULATORY PROTEIN-DTXR HOMOLOG; Iron-binding repressor of the dipheteria toxin gene expression. May serve as a global regulator of gene expression (By similarity). Represses ripA under iron excess.
      
 0.452
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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