STRINGSTRING
Cgl0124 Cgl0124 Cgl0123 Cgl0123 pcaR pcaR Cgl0122 Cgl0122 Cgl0336 Cgl0336 Cgl1714 Cgl1714 Cgl0501 Cgl0501 Cgl0502 Cgl0502 Cgl0392 Cgl0392 ripA ripA Cgl0387 Cgl0387
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0124Hypothetical protein. (148 aa)    
Predicted Functional Partners:
Cgl0123
Hypothetical protein predicted by Glimmer/Critica.
 
  
 0.997
pcaR
Bacterial regulatory proteins, IclR family.
      
 0.981
Cgl0122
PUTATIVE MEMBRANE TRANSPORT PROTEIN.
       0.493
Cgl0336
cobalamin/Fe3+-siderophores transport system, secreted component.
   
    0.487
Cgl1714
Putative secreted hydrolase.
   
    0.479
Cgl0501
cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
    0.476
Cgl0502
cobalamin/Fe3+-siderophores transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
    0.475
Cgl0392
Conserved secreted protein.
   
    0.473
ripA
AraC-type DNA-binding domain-containing protein; Under iron limitation, RipA negatively controls the expression of the acn (aconitase), catA (catechol 1,2 dioxygenase), leuCD (isopropylmalate dehydratase), narKGHJI (nitrite/nitrate transporter and nitrate reductase), sdhCAB (succinate dehydrogenase), pta (phosphotransacetylase) and katA (catalase) genes. Binds to the consensus sequence in the promoter region.
   
    0.473
Cgl0387
Conserved hypothetical membrane protein.
   
    0.470
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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