Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0007 | Cgl0137 | cg0008 | cg0174 | HYPOTHETICAL PROTEIN. | PUTATIVE TRANSPORT PROTEIN. | 0.531 |
Cgl0137 | Cgl0007 | cg0174 | cg0008 | PUTATIVE TRANSPORT PROTEIN. | HYPOTHETICAL PROTEIN. | 0.531 |
Cgl0137 | Cgl0138 | cg0174 | cg0176 | PUTATIVE TRANSPORT PROTEIN. | Permease. | 0.623 |
Cgl0137 | Cgl0139 | cg0174 | cg0175 | PUTATIVE TRANSPORT PROTEIN. | Secreted protein, Signal peptide. | 0.703 |
Cgl0137 | Cgl0289 | cg0174 | cg0347 | PUTATIVE TRANSPORT PROTEIN. | Acyl dehydratase. | 0.960 |
Cgl0137 | Cgl2824 | cg0174 | cg3126 | PUTATIVE TRANSPORT PROTEIN. | Putative membrane protein. | 0.402 |
Cgl0137 | rpoZ | cg0174 | cg1809 | PUTATIVE TRANSPORT PROTEIN. | DNA-directed RNA polymerase subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.700 |
Cgl0138 | Cgl0137 | cg0176 | cg0174 | Permease. | PUTATIVE TRANSPORT PROTEIN. | 0.623 |
Cgl0138 | Cgl0139 | cg0176 | cg0175 | Permease. | Secreted protein, Signal peptide. | 0.530 |
Cgl0139 | Cgl0137 | cg0175 | cg0174 | Secreted protein, Signal peptide. | PUTATIVE TRANSPORT PROTEIN. | 0.703 |
Cgl0139 | Cgl0138 | cg0175 | cg0176 | Secreted protein, Signal peptide. | Permease. | 0.530 |
Cgl0289 | Cgl0137 | cg0347 | cg0174 | Acyl dehydratase. | PUTATIVE TRANSPORT PROTEIN. | 0.960 |
Cgl2824 | Cgl0137 | cg3126 | cg0174 | Putative membrane protein. | PUTATIVE TRANSPORT PROTEIN. | 0.402 |
rpoZ | Cgl0137 | cg1809 | cg0174 | DNA-directed RNA polymerase subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | PUTATIVE TRANSPORT PROTEIN. | 0.700 |