STRINGSTRING
Cgl0179 Cgl0179 Cgl2111 Cgl2111 cg2730 cg2730 ipsA ipsA cg2729 cg2729 Cgl0178 Cgl0178 gltB gltB Cgl0180 Cgl0180 ptsH ptsH Cgl2894 Cgl2894
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0179PROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR. (367 aa)    
Predicted Functional Partners:
Cgl2111
Transcriptional regulator, LacI family.
  
    0.775
cg2730
Transcriptional regulator, C-terminus.
  
     0.775
ipsA
Transcriptional regulator, LacI family; Plays a role in the regulation of cell wall biogenesis. Inositol-dependent transcriptional activator of ino1, which encodes inositol phosphate synthase. Also regulates other target genes, which are most likely involved in the synthesis of inositol-derived cell wall components and mycothiol. Acts by binding to a conserved palindromic motif within the promoter regions.
  
    0.775
cg2729
TRANSCRIPTIONAL REPRESSOR, LACI FAMILY, N-terminus.
  
     0.746
Cgl0178
Acetyltransferase, GNAT family.
  
    0.727
gltB
GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU.
    
 
 0.695
Cgl0180
Membrane protein.
  
    0.557
ptsH
PHOSPHOCARRIER PROTEIN HPR.
   
 
 0.503
Cgl2894
Bacterial regulatory proteins, GntR family.
  
   
 0.430
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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