Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
benC | carA | cg2639 | cg1814 | BENZOATE DIOXYGENASE REDUCTASE. | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | 0.776 |
benC | carB | cg2639 | cg1813 | BENZOATE DIOXYGENASE REDUCTASE. | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | 0.791 |
benC | gltD | cg2639 | cg0230 | BENZOATE DIOXYGENASE REDUCTASE. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE. | 0.988 |
benC | putA | cg2639 | cg0129 | BENZOATE DIOXYGENASE REDUCTASE. | PROLINE DEHYDROGENASE/DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE. | 0.644 |
carA | benC | cg1814 | cg2639 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | BENZOATE DIOXYGENASE REDUCTASE. | 0.776 |
carA | carB | cg1814 | cg1813 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | 0.999 |
carA | glmS | cg1814 | cg2492 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | PROBABLE GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.912 |
carA | glnA | cg1814 | cg2429 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | GLUTAMINE SYNTHETASE I. | 0.918 |
carA | glnA2 | cg1814 | cg2447 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | GLUTAMINE SYNTHETASE 2. | 0.915 |
carA | gltB | cg1814 | cg0229 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.931 |
carA | gltD | cg1814 | cg0230 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE. | 0.902 |
carA | purF | cg1814 | cg2857 | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | AMIDOPHOSPHORIBOSYLTRANSFERASE; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.957 |
carB | benC | cg1813 | cg2639 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | BENZOATE DIOXYGENASE REDUCTASE. | 0.791 |
carB | carA | cg1813 | cg1814 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | CARBAMOYL PHOSPHATE SYNTHASE SMALL SUBUNIT; Belongs to the CarA family. | 0.999 |
carB | glmS | cg1813 | cg2492 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | PROBABLE GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.928 |
carB | glnA | cg1813 | cg2429 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | GLUTAMINE SYNTHETASE I. | 0.915 |
carB | glnA2 | cg1813 | cg2447 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | GLUTAMINE SYNTHETASE 2. | 0.914 |
carB | gltB | cg1813 | cg0229 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.978 |
carB | gltD | cg1813 | cg0230 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE. | 0.922 |
carB | purF | cg1813 | cg2857 | PUTATIVE CARBAMOYL-PHOSPHATE SYNTHASE SUBUNIT. | AMIDOPHOSPHORIBOSYLTRANSFERASE; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.968 |
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