Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0205 | Cgl0548 | cg0253 | cg0639 | Flavodoxin reductase. | FERREDOXIN REDUCTASE. | 0.982 |
Cgl0205 | Cgl1067 | cg0253 | cg1214 | Flavodoxin reductase. | Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme. | 0.541 |
Cgl0205 | Cgl1560 | cg0253 | cg1760 | Flavodoxin reductase. | NifU homologs involved in Fe-S cluster formation. | 0.693 |
Cgl0205 | Cgl2859 | cg0253 | cg3165 | Flavodoxin reductase. | Putative membrane protein. | 0.492 |
Cgl0205 | cysJ | cg0253 | cg3119 | Flavodoxin reductase. | Probable Sulfite Reductase (Flavoprotein). | 0.586 |
Cgl0205 | cytP | cg0253 | cg0645 | Flavodoxin reductase. | CYTOCHROME P450. | 0.689 |
Cgl0205 | fprA | cg0253 | cg3049 | Flavodoxin reductase. | PUTATIVE FERREDOXIN/FERREDOXIN-NADP REDUCTASE. | 0.586 |
Cgl0205 | gltD | cg0253 | cg0230 | Flavodoxin reductase. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE. | 0.586 |
Cgl0205 | moaC | cg0253 | cg0260 | Flavodoxin reductase. | MOLYBDOPTERIN CO-FACTOR SYNTHESIS PROTEIN; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.623 |
Cgl0205 | nifS1 | cg0253 | cg1388 | Flavodoxin reductase. | PROBABLE PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE/CYSTEINE DESULFINASE. | 0.541 |
Cgl0548 | Cgl0205 | cg0639 | cg0253 | FERREDOXIN REDUCTASE. | Flavodoxin reductase. | 0.982 |
Cgl0548 | cytP | cg0639 | cg0645 | FERREDOXIN REDUCTASE. | CYTOCHROME P450. | 0.977 |
Cgl1067 | Cgl0205 | cg1214 | cg0253 | Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme. | Flavodoxin reductase. | 0.541 |
Cgl1067 | Cgl1560 | cg1214 | cg1760 | Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme. | NifU homologs involved in Fe-S cluster formation. | 0.979 |
Cgl1067 | nifS1 | cg1214 | cg1388 | Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme. | PROBABLE PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE/CYSTEINE DESULFINASE. | 0.919 |
Cgl1560 | Cgl0205 | cg1760 | cg0253 | NifU homologs involved in Fe-S cluster formation. | Flavodoxin reductase. | 0.693 |
Cgl1560 | Cgl1067 | cg1760 | cg1214 | NifU homologs involved in Fe-S cluster formation. | Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme. | 0.979 |
Cgl1560 | nifS1 | cg1760 | cg1388 | NifU homologs involved in Fe-S cluster formation. | PROBABLE PYRIDOXAL-PHOSPHATE-DEPENDENT AMINOTRANSFERASE/CYSTEINE DESULFINASE. | 0.976 |
Cgl2859 | Cgl0205 | cg3165 | cg0253 | Putative membrane protein. | Flavodoxin reductase. | 0.492 |
cysJ | Cgl0205 | cg3119 | cg0253 | Probable Sulfite Reductase (Flavoprotein). | Flavodoxin reductase. | 0.586 |
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