Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0888 | sigC | cg1011 | cg0309 | Putative membrane protein. | Sigma-70 factor (ECF subfamily). | 0.572 |
Cgl1674 | Cgl2456 | cg1884 | cg2699 | Putative membrane protein. | Putative membrane protein. | 0.997 |
Cgl1674 | sigC | cg1884 | cg0309 | Putative membrane protein. | Sigma-70 factor (ECF subfamily). | 0.628 |
Cgl2241 | Cgl2456 | cg2460 | cg2699 | Putative membrane protein. | Putative membrane protein. | 0.581 |
Cgl2241 | sigC | cg2460 | cg0309 | Putative membrane protein. | Sigma-70 factor (ECF subfamily). | 0.806 |
Cgl2456 | Cgl1674 | cg2699 | cg1884 | Putative membrane protein. | Putative membrane protein. | 0.997 |
Cgl2456 | Cgl2241 | cg2699 | cg2460 | Putative membrane protein. | Putative membrane protein. | 0.581 |
Cgl2456 | sigC | cg2699 | cg0309 | Putative membrane protein. | Sigma-70 factor (ECF subfamily). | 0.800 |
cg0877 | sigB | cg0877 | cg2102 | Putative anti-sigma factor. | RNA POLYMERASE SIGMA FACTOR; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.628 |
cg0877 | sigC | cg0877 | cg0309 | Putative anti-sigma factor. | Sigma-70 factor (ECF subfamily). | 0.846 |
cg0877 | sigD | cg0877 | cg0696 | Putative anti-sigma factor. | PUTATIVE RNA POLYMERASE SIGMA FACTOR, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.867 |
cg0877 | sigH | cg0877 | cg0876 | Putative anti-sigma factor. | PUTATIVE RNA POLYMERASE SIGMA FACTOR, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.969 |
cg0877 | sigM | cg0877 | cg3420 | Putative anti-sigma factor. | RNA POLYMERASE SIGMA-70 FACTOR, ECF SUBFAMILY. | 0.784 |
katA | sigC | cg0310 | cg0309 | CATALASE. | Sigma-70 factor (ECF subfamily). | 0.694 |
sigB | cg0877 | cg2102 | cg0877 | RNA POLYMERASE SIGMA FACTOR; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative anti-sigma factor. | 0.628 |
sigB | sigC | cg2102 | cg0309 | RNA POLYMERASE SIGMA FACTOR; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma-70 factor (ECF subfamily). | 0.959 |
sigB | sigD | cg2102 | cg0696 | RNA POLYMERASE SIGMA FACTOR; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PUTATIVE RNA POLYMERASE SIGMA FACTOR, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.959 |
sigB | sigH | cg2102 | cg0876 | RNA POLYMERASE SIGMA FACTOR; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PUTATIVE RNA POLYMERASE SIGMA FACTOR, ECF family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.986 |
sigB | sigM | cg2102 | cg3420 | RNA POLYMERASE SIGMA FACTOR; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA POLYMERASE SIGMA-70 FACTOR, ECF SUBFAMILY. | 0.959 |
sigC | Cgl0888 | cg0309 | cg1011 | Sigma-70 factor (ECF subfamily). | Putative membrane protein. | 0.572 |
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