STRINGSTRING
sigC sigC sigD sigD sigB sigB cg0877 cg0877 Cgl2241 Cgl2241 Cgl2456 Cgl2456 katA katA sigH sigH sigM sigM Cgl1674 Cgl1674 Cgl0888 Cgl0888
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sigCSigma-70 factor (ECF subfamily). (193 aa)    
Predicted Functional Partners:
sigD
PUTATIVE RNA POLYMERASE SIGMA FACTOR, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.972
sigB
RNA POLYMERASE SIGMA FACTOR; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
  
 0.959
cg0877
Putative anti-sigma factor.
  
 
 0.846
Cgl2241
Putative membrane protein.
   
  
 0.806
Cgl2456
Putative membrane protein.
      
 0.800
katA
CATALASE.
     
 0.694
sigH
PUTATIVE RNA POLYMERASE SIGMA FACTOR, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
0.688
sigM
RNA POLYMERASE SIGMA-70 FACTOR, ECF SUBFAMILY.
  
  
0.651
Cgl1674
Putative membrane protein.
  
  
 0.628
Cgl0888
Putative membrane protein.
 
   0.572
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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