Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0274 | Cgl0275 | cg0333 | cg0332 | POSSIBLE MEMBRANE PROTEIN. | Secreted protein. | 0.505 |
Cgl0274 | cgtR1 | cg0333 | cg0330 | POSSIBLE MEMBRANE PROTEIN. | PUTATIVE TWO COMPONENT RESPONSE REGULATOR. | 0.468 |
Cgl0274 | cgtS1 | cg0333 | cg0331 | POSSIBLE MEMBRANE PROTEIN. | PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE. | 0.480 |
Cgl0275 | Cgl0274 | cg0332 | cg0333 | Secreted protein. | POSSIBLE MEMBRANE PROTEIN. | 0.505 |
Cgl0275 | cgtR1 | cg0332 | cg0330 | Secreted protein. | PUTATIVE TWO COMPONENT RESPONSE REGULATOR. | 0.779 |
Cgl0275 | cgtS1 | cg0332 | cg0331 | Secreted protein. | PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE. | 0.779 |
cgtR1 | Cgl0274 | cg0330 | cg0333 | PUTATIVE TWO COMPONENT RESPONSE REGULATOR. | POSSIBLE MEMBRANE PROTEIN. | 0.468 |
cgtR1 | Cgl0275 | cg0330 | cg0332 | PUTATIVE TWO COMPONENT RESPONSE REGULATOR. | Secreted protein. | 0.779 |
cgtR1 | cgtS1 | cg0330 | cg0331 | PUTATIVE TWO COMPONENT RESPONSE REGULATOR. | PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE. | 0.971 |
cgtS1 | Cgl0274 | cg0331 | cg0333 | PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE. | POSSIBLE MEMBRANE PROTEIN. | 0.480 |
cgtS1 | Cgl0275 | cg0331 | cg0332 | PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE. | Secreted protein. | 0.779 |
cgtS1 | cgtR1 | cg0331 | cg0330 | PROBABLE TWO-COMPONENT SENSOR HISTIDINE KINASE. | PUTATIVE TWO COMPONENT RESPONSE REGULATOR. | 0.971 |