STRINGSTRING
rmlB2 rmlB2 udgA2 udgA2 glf glf udgA1 udgA1 galU2 galU2 galE galE galU1 galU1 rmlCD rmlCD Cgl0322 Cgl0322 rpsC rpsC rpsS rpsS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmlB2PUTATIVE DTDP-GLUCOSE 4,6-DEHYDRATASE. (311 aa)    
Predicted Functional Partners:
udgA2
UDP-GLUCOSE 6-DEHYDROGENASE.
 0.969
glf
UDP-GALACTOPYRANOSE MUTASE.
  
 
 0.950
udgA1
UDP-GLUCOSE 6-DEHYDROGENASE; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 0.949
galU2
PUTATIVE UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERA.
 
 0.922
galE
UDP-GLUCOSE 4-EPIMERASE; Involved in the metabolism of galactose. Catalyzes the conversion of UDP-galactose (UDP-Gal) to UDP-glucose (UDP-Glc) through a mechanism involving the transient reduction of NAD (Probable).
 
0.922
galU1
UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE.
 
 0.921
rmlCD
DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, dtdp-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.840
Cgl0322
Permease, major facilitator family.
  
    0.788
rpsC
30S RIBOSOMAL PROTEIN S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 0.780
rpsS
30S RIBOSOMAL PROTEIN S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.779
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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