Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0337 | Cgl0338 | cg0407 | cg0408 | Secreted protein. | Membrane protein. | 0.440 |
Cgl0337 | Cgl0339 | cg0407 | cg0409 | Secreted protein. | PROBABLE METALLOPEPTIDASE. | 0.440 |
Cgl0337 | Cgl0340 | cg0407 | cg0410 | Secreted protein. | PUTATIVE PROLYL ENDOPEPTIDASE. | 0.448 |
Cgl0338 | Cgl0337 | cg0408 | cg0407 | Membrane protein. | Secreted protein. | 0.440 |
Cgl0338 | Cgl0339 | cg0408 | cg0409 | Membrane protein. | PROBABLE METALLOPEPTIDASE. | 0.838 |
Cgl0338 | Cgl0340 | cg0408 | cg0410 | Membrane protein. | PUTATIVE PROLYL ENDOPEPTIDASE. | 0.834 |
Cgl0338 | udgA1 | cg0408 | cg0435 | Membrane protein. | UDP-GLUCOSE 6-DEHYDROGENASE; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.536 |
Cgl0339 | Cgl0337 | cg0409 | cg0407 | PROBABLE METALLOPEPTIDASE. | Secreted protein. | 0.440 |
Cgl0339 | Cgl0338 | cg0409 | cg0408 | PROBABLE METALLOPEPTIDASE. | Membrane protein. | 0.838 |
Cgl0339 | Cgl0340 | cg0409 | cg0410 | PROBABLE METALLOPEPTIDASE. | PUTATIVE PROLYL ENDOPEPTIDASE. | 0.844 |
Cgl0339 | Cgl0395 | cg0409 | cg0474 | PROBABLE METALLOPEPTIDASE. | Conserved hypothetical protein. | 0.534 |
Cgl0339 | bglG | cg0409 | cg3144 | PROBABLE METALLOPEPTIDASE. | Transcriptional antiterminator-fragment. | 0.459 |
Cgl0339 | cps | cg0409 | cg3003 | PROBABLE METALLOPEPTIDASE. | NON-RIBOSOMAL PEPTIDE SYNTHETASE. | 0.933 |
Cgl0339 | fusA | cg0409 | cg0583 | PROBABLE METALLOPEPTIDASE. | ELONGATION FACTOR G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.450 |
Cgl0339 | pepB | cg0409 | cg2419 | PROBABLE METALLOPEPTIDASE. | LEUCINE AMINOPEPTIDASE; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.455 |
Cgl0339 | udgA1 | cg0409 | cg0435 | PROBABLE METALLOPEPTIDASE. | UDP-GLUCOSE 6-DEHYDROGENASE; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. | 0.542 |
Cgl0339 | xseB | cg0409 | cg1162 | PROBABLE METALLOPEPTIDASE. | PUTATIVE EXODEOXYRIBONUCLEASE PROTEIN; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.637 |
Cgl0340 | Cgl0337 | cg0410 | cg0407 | PUTATIVE PROLYL ENDOPEPTIDASE. | Secreted protein. | 0.448 |
Cgl0340 | Cgl0338 | cg0410 | cg0408 | PUTATIVE PROLYL ENDOPEPTIDASE. | Membrane protein. | 0.834 |
Cgl0340 | Cgl0339 | cg0410 | cg0409 | PUTATIVE PROLYL ENDOPEPTIDASE. | PROBABLE METALLOPEPTIDASE. | 0.844 |
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