STRINGSTRING
Cgl0392 Cgl0392 Cgl0393 Cgl0393 Cgl0389 Cgl0389 Cgl0391 Cgl0391 Cgl1714 Cgl1714 Cgl2011 Cgl2011 Cgl0336 Cgl0336 Cgl0390 Cgl0390 Cgl2012 Cgl2012 ripA ripA Cgl0500 Cgl0500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0392Conserved secreted protein. (319 aa)    
Predicted Functional Partners:
Cgl0393
Conserved secreted protein.
  
  
0.983
Cgl0389
cobalamin/Fe3+-siderophores transport system, secreted component.
 
  
 0.946
Cgl0391
cobalamin/Fe3+-siderophores transport system, ATPase component.
 
  
 0.900
Cgl1714
Putative secreted hydrolase.
   
    0.899
Cgl2011
ABC-type transport system, involved in lipoprotein release, permease component.
   
  
 0.883
Cgl0336
cobalamin/Fe3+-siderophores transport system, secreted component.
   
    0.882
Cgl0390
cobalamin/Fe3+-siderophores transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.874
Cgl2012
ABC-type transport system, involved in lipoprotein release, ATPase component.
   
  
 0.869
ripA
AraC-type DNA-binding domain-containing protein; Under iron limitation, RipA negatively controls the expression of the acn (aconitase), catA (catechol 1,2 dioxygenase), leuCD (isopropylmalate dehydratase), narKGHJI (nitrite/nitrate transporter and nitrate reductase), sdhCAB (succinate dehydrogenase), pta (phosphotransacetylase) and katA (catalase) genes. Binds to the consensus sequence in the promoter region.
   
    0.860
Cgl0500
ABC TRANSPORTER, NUCLEOTIDE BINDING/ATPASE PROTEIN.
   
    0.853
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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