STRINGSTRING
Cgl0428 Cgl0428 Cgl0427 Cgl0427 Cgl0426 Cgl0426 Cgl0532 Cgl0532 Cgl0533 Cgl0533 Cgl1559 Cgl1559 cg3434 cg3434 cg3289 cg3289 katA katA cg3288 cg3288 Cgl2963 Cgl2963
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0428Iron/thiamine transport system, secreted component. (359 aa)    
Predicted Functional Partners:
Cgl0427
ABC TRANSPORT SYSTEM PERMEASE PROTEIN.
 
 
 0.999
Cgl0426
Spermidine/putrescine transport system, ATPase component.
 
 0.986
Cgl0532
Cobalt transport system, ATPase component.
   
    0.856
Cgl0533
Cobalt transport system, permease component.
   
    0.853
Cgl1559
Predicted metal-sulfur cluster biosynthetic enzyme.
      
 0.700
cg3434
Hypothetical protein predicted by Glimmer/Critica.
      
 0.700
cg3289
Thiol-disulfide isomerase or thioredoxin.
   
 
 0.643
katA
CATALASE.
   
 
 0.638
cg3288
Hypothetical protein predicted by Glimmer.
   
  
 0.623
Cgl2963
Hypothetical protein predicted by Glimmer.
      
 0.610
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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