STRINGSTRING
ccsA ccsA Cgl0439 Cgl0439 Cgl0441 Cgl0441 ccsB ccsB hemL hemL Cgl0438 Cgl0438 hemY hemY hemE hemE cg3289 cg3289 Cgl0018 Cgl0018 hemA hemA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccsACytochrome c biogenesis protein transmembrane prot. (268 aa)    
Predicted Functional Partners:
Cgl0439
Secreted thiol-disulfide isomerase or thioredoxin.
 
  
 0.998
Cgl0441
Membrane protein required for cytochrome c biosynthesis.
 
  
 0.992
ccsB
Cytochrome c assembly membrane protein.
 
  
 0.987
hemL
GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE.
  
  
 0.963
Cgl0438
PUTATIVE PHOSPHOGLYCERATE MUTASE.
  
    0.916
hemY
PUTATIVE PROTOPORPHYRINOGEN OXIDASE; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
  
 0.897
hemE
UROPORPHYRINOGEN DECARBOXYLASE; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
  
 0.880
cg3289
Thiol-disulfide isomerase or thioredoxin.
 
  
 0.774
Cgl0018
PUTATIVE INTEGRAL MEMBRANE CYTOCHROME BIOGENESIS PROTEIN.
  
     0.698
hemA
GLUTAMYL-TRNA REDUCTASE; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
  
  
 0.683
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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