STRINGSTRING
menE menE menB menB menC menC Cgl0451 Cgl0451 menD menD pks pks menA menA Cgl0032 Cgl0032 Cgl1260 Cgl1260 Cgl0030 Cgl0030 Cgl3060 Cgl3060
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menEO-SUCCINYLBENZOIC ACID-COA LIGASE. (408 aa)    
Predicted Functional Partners:
menB
DIHYDROXYNAPHTHONIC ACID SYNTHASE; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
 
 0.995
menC
Similar to o-succinylbenzoate-coa synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
  0.979
Cgl0451
PUTATIVE INTEGRAL MEMBRANE PROTEIN.
  
  
 0.940
menD
2-OXOGLUTARATE DECARBOXYLASE; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
  
 0.926
pks
POLYKETIDE SYNTHASE.
 
 0.839
menA
1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
 
   
 0.788
Cgl0032
PROBABLE ABC TRANSPORT PROTEIN, ATP-BINDING COMPON.
   
  
 0.711
Cgl1260
Putative dinucleotide-binding enzyme.
   
  
 0.710
Cgl0030
PROBABLE SOLUTE-BINDING LIPOPROTEIN, signal peptide.
   
  
 0.709
Cgl3060
Predicted dehydrogenase.
   
  
 0.708
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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