Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0470 | Cgl1812 | cg0555 | cg2032 | Amino acid permease. | Putative membrane protein. | 0.600 |
Cgl0470 | Cgl2098 | cg0555 | cg2301 | Amino acid permease. | Permease of the major facilitator superfamily. | 0.773 |
Cgl0470 | Cgl2099 | cg0555 | cg2302 | Amino acid permease. | Putative membrane protein. | 0.773 |
Cgl0470 | hisS | cg0555 | cg1855 | Amino acid permease. | HISTIDYL-TRNA SYNTHETASE. | 0.451 |
Cgl0470 | mgtA | cg0555 | cg0554 | Amino acid permease. | GLYCOSYL TRANSFERASE; Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2); Belongs to the glycosyltransferase group 1 family. | 0.495 |
Cgl0470 | ubiE | cg0555 | cg0556 | Amino acid permease. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFER; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.693 |
Cgl1812 | Cgl0470 | cg2032 | cg0555 | Putative membrane protein. | Amino acid permease. | 0.600 |
Cgl1812 | Cgl2098 | cg2032 | cg2301 | Putative membrane protein. | Permease of the major facilitator superfamily. | 0.775 |
Cgl1812 | Cgl2099 | cg2032 | cg2302 | Putative membrane protein. | Putative membrane protein. | 0.710 |
Cgl2098 | Cgl0470 | cg2301 | cg0555 | Permease of the major facilitator superfamily. | Amino acid permease. | 0.773 |
Cgl2098 | Cgl1812 | cg2301 | cg2032 | Permease of the major facilitator superfamily. | Putative membrane protein. | 0.775 |
Cgl2098 | Cgl2099 | cg2301 | cg2302 | Permease of the major facilitator superfamily. | Putative membrane protein. | 0.979 |
Cgl2099 | Cgl0470 | cg2302 | cg0555 | Putative membrane protein. | Amino acid permease. | 0.773 |
Cgl2099 | Cgl1812 | cg2302 | cg2032 | Putative membrane protein. | Putative membrane protein. | 0.710 |
Cgl2099 | Cgl2098 | cg2302 | cg2301 | Putative membrane protein. | Permease of the major facilitator superfamily. | 0.979 |
hisS | Cgl0470 | cg1855 | cg0555 | HISTIDYL-TRNA SYNTHETASE. | Amino acid permease. | 0.451 |
mgtA | Cgl0470 | cg0554 | cg0555 | GLYCOSYL TRANSFERASE; Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2); Belongs to the glycosyltransferase group 1 family. | Amino acid permease. | 0.495 |
mgtA | ubiE | cg0554 | cg0556 | GLYCOSYL TRANSFERASE; Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2); Belongs to the glycosyltransferase group 1 family. | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFER; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.868 |
ubiE | Cgl0470 | cg0556 | cg0555 | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFER; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | Amino acid permease. | 0.693 |
ubiE | mgtA | cg0556 | cg0554 | UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFER; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | GLYCOSYL TRANSFERASE; Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2); Belongs to the glycosyltransferase group 1 family. | 0.868 |