STRINGSTRING
ispB ispB uppS2 uppS2 idsA idsA crtE crtE idi idi crtB crtB Cgl0472 Cgl0472 uppS1 uppS1 crtB2 crtB2 ubiE ubiE rnj rnj
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ispBPUTATIVE OCTAPRENYL-DIPHOSPHATE SYNTHASE PROTEIN; Belongs to the FPP/GGPP synthase family. (350 aa)    
Predicted Functional Partners:
uppS2
PUTATIVE UNDECAPRENYL DIPHOSPHATE SYNTHASE; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.974
idsA
PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE; Belongs to the FPP/GGPP synthase family.
  
 
0.935
crtE
Geranylgeranyl-pyrophosphate sythase; Belongs to the FPP/GGPP synthase family.
  
 
0.925
idi
ISOPENTENYLDIPHOSPHATE ISOMERASE; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.810
crtB
PHYTOENE SYNTHETASE.
  
 
 0.796
Cgl0472
MONOOXYGENASE, FAD-BINDING, PUTATIVE.
 
 
 0.768
uppS1
PUTATIVE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.722
crtB2
PHYTOENE SYNTHETASE.
  
 
 0.720
ubiE
UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFER; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
  
 0.583
rnj
HYDROLASE OF METALLO-BETA-LACTAMASE SUPERFAMILY; An RNase that has 5'-3' exonuclease and possibly endoonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay (By similarity). Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.
  
    0.493
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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