STRINGSTRING
gabD2 gabD2 gabT gabT gabD1 gabD1 sdhA sdhA gabD3 gabD3 sdhB sdhB actA actA sdhCD sdhCD fmt fmt odhA odhA gltA gltA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
gabD2PUTATIVE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE (NADP+); Belongs to the aldehyde dehydrogenase family. (453 aa)    
Predicted Functional Partners:
gabT
PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.994
gabD1
PROBABLE SUCCINATE-SEMIALDEHYDE DEHYDROGENASE OXIDOREDUCTASE; Belongs to the aldehyde dehydrogenase family.
  
 
0.936
sdhA
Succinate dehydrogenase A.
   
 0.915
gabD3
SUCCINATE-SEMIALDEHYDE DEHYDROGENASE (NADP+); Belongs to the aldehyde dehydrogenase family.
  
  
0.909
sdhB
Succinate dehydrogenase B.
   
 
 0.909
actA
BUTYRYL-COA:ACETATE COENZYME A TRANSFERASE.
  
 
 0.902
sdhCD
Succinate dehydrogenase CD.
     
  0.900
fmt
METHIONYL-TRNA FORMYLTRANSFERASE; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.900
odhA
2-OXOGLUTARATE DEHYDROGENASE; Catalyzes the E1 and E2 reactions as part of 2-oxoglutarate dehydrogenase (ODH) activity, to convert 2-oxoglutarate to succinyl-CoA and CO(2). OdhA has reductase activity with 2-oxoglutarate but does not react with pyruvate, and also displays transsuccinylase but no transacetylase activity. Since OdhA is not lipoylated, the succinyltransferase activity of its E2 domain is dependent on lipoyl residues of the acetyltransferase AceF.
  
 0.855
gltA
CITRATE SYNTHASE.
   
 0.850
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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