Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0481 | Cgl0482 | cg0568 | cg0569 | Permease for amino acids and related compounds, fa. | CATION-TRANSPORTING ATPASE. | 0.640 |
Cgl0481 | Cgl0483 | cg0568 | cg0570 | Permease for amino acids and related compounds, fa. | PUTATIVE DEHYDROGENASE. | 0.481 |
Cgl0481 | Cgl0484 | cg0568 | cg0571 | Permease for amino acids and related compounds, fa. | Hypothetical protein. | 0.459 |
Cgl0481 | gabT | cg0568 | cg0566 | Permease for amino acids and related compounds, fa. | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.867 |
Cgl0482 | Cgl0481 | cg0569 | cg0568 | CATION-TRANSPORTING ATPASE. | Permease for amino acids and related compounds, fa. | 0.640 |
Cgl0482 | Cgl0483 | cg0569 | cg0570 | CATION-TRANSPORTING ATPASE. | PUTATIVE DEHYDROGENASE. | 0.729 |
Cgl0482 | Cgl0484 | cg0569 | cg0571 | CATION-TRANSPORTING ATPASE. | Hypothetical protein. | 0.708 |
Cgl0482 | gabT | cg0569 | cg0566 | CATION-TRANSPORTING ATPASE. | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.424 |
Cgl0483 | Cgl0481 | cg0570 | cg0568 | PUTATIVE DEHYDROGENASE. | Permease for amino acids and related compounds, fa. | 0.481 |
Cgl0483 | Cgl0482 | cg0570 | cg0569 | PUTATIVE DEHYDROGENASE. | CATION-TRANSPORTING ATPASE. | 0.729 |
Cgl0483 | Cgl0484 | cg0570 | cg0571 | PUTATIVE DEHYDROGENASE. | Hypothetical protein. | 0.770 |
Cgl0483 | gabT | cg0570 | cg0566 | PUTATIVE DEHYDROGENASE. | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.418 |
Cgl0483 | rplJ | cg0570 | cg0572 | PUTATIVE DEHYDROGENASE. | 50S RIBOSOMAL PROTEIN L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.411 |
Cgl0484 | Cgl0481 | cg0571 | cg0568 | Hypothetical protein. | Permease for amino acids and related compounds, fa. | 0.459 |
Cgl0484 | Cgl0482 | cg0571 | cg0569 | Hypothetical protein. | CATION-TRANSPORTING ATPASE. | 0.708 |
Cgl0484 | Cgl0483 | cg0571 | cg0570 | Hypothetical protein. | PUTATIVE DEHYDROGENASE. | 0.770 |
Cgl0484 | Cgl0853 | cg0571 | cg0975 | Hypothetical protein. | Putative chorismate mutase. | 0.491 |
Cgl0484 | gabT | cg0571 | cg0566 | Hypothetical protein. | PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.409 |
Cgl0484 | rplJ | cg0571 | cg0572 | Hypothetical protein. | 50S RIBOSOMAL PROTEIN L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.411 |
Cgl0853 | Cgl0484 | cg0975 | cg0571 | Putative chorismate mutase. | Hypothetical protein. | 0.491 |
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