STRINGSTRING
Cgl0492 Cgl0492 Cgl0227 Cgl0227 rpsL rpsL rpsG rpsG Cgl1099 Cgl1099 Cgl2512 Cgl2512 cgtS6 cgtS6 pknG pknG Cgl1214 Cgl1214 Cgl2749 Cgl2749 Cgl2792 Cgl2792
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0492Conserved hypothetical protein. (266 aa)    
Predicted Functional Partners:
Cgl0227
Conserved hypothetical protein.
  
    0.653
rpsL
RIBOSOMAL PROTEIN S12; With S4 and S5 plays an important role in translational accuracy.
       0.531
rpsG
30S RIBOSOMAL PROTEIN S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
       0.531
Cgl1099
ABC-type dipeptide/oligopeptide/nickel transport system, secreted component.
  
     0.517
Cgl2512
Membrane protein (homolog of Drosophila rhomboid).
  
     0.474
cgtS6
Probable two component sensor kinase.
 
    0.467
pknG
Serine/threonine protein kinase.
 
    0.438
Cgl1214
Conserved hypothetical protein.
  
     0.434
Cgl2749
Putative membrane protein.
  
    0.434
Cgl2792
2-polyprenylphenol hydroxylase or related flavodoxin oxidoreductase.
  
    0.410
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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