STRINGSTRING
Cgl0524 Cgl0524 rplN rplN rplX rplX rplE rplE Cgl1445 Cgl1445 cps cps Cgl2746 Cgl2746 Cgl2422 Cgl2422 Cgl0231 Cgl0231 Cgl0396 Cgl0396 mmpL1 mmpL1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0524Secreted protein. (324 aa)    
Predicted Functional Partners:
rplN
50S RIBOSOMAL PROTEIN L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
    0.547
rplX
50S RIBOSOMAL PROTEIN L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
  
    0.528
rplE
50S RIBOSOMAL PROTEIN L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
  
    0.520
Cgl1445
Putative membrane protein.
  
     0.449
cps
NON-RIBOSOMAL PEPTIDE SYNTHETASE.
 
  
 0.446
Cgl2746
ABC-type multidrug transport system, permease component.
  
    0.437
Cgl2422
Putative membrane protein-fragment.
  
     0.434
Cgl0231
Drug exporter of the RND superfamily.
  
     0.432
Cgl0396
Conserved hypothetical protein.
  
     0.416
mmpL1
Exporter of the MMPL family.
  
    0.416
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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