Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0159 | Cgl0528 | cg0198 | cg0617 | Conserved hypothetical protein. | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | 0.536 |
Cgl0159 | Cgl1140 | cg0198 | cg1291 | Conserved hypothetical protein. | Putative membrane protein. | 0.598 |
Cgl0159 | Cgl1437 | cg0198 | cg1625 | Conserved hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.596 |
Cgl0234 | Cgl0528 | cg0287 | cg0617 | Similar to malic enzyme. | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | 0.511 |
Cgl0526 | Cgl0528 | cg0614 | cg0617 | Hypothetical protein predicted by Glimmer/Critica. | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | 0.778 |
Cgl0526 | dkg | cg0614 | cg0612 | Hypothetical protein predicted by Glimmer/Critica. | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE. | 0.714 |
Cgl0526 | fdhD | cg0614 | cg0616 | Hypothetical protein predicted by Glimmer/Critica. | FORMATE DEHYDROGENASE CHAIN D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.778 |
Cgl0526 | fdhF | cg0614 | cg0618 | Hypothetical protein predicted by Glimmer/Critica. | PUTATIVE FORMATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.553 |
Cgl0528 | Cgl0159 | cg0617 | cg0198 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | Conserved hypothetical protein. | 0.536 |
Cgl0528 | Cgl0234 | cg0617 | cg0287 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | Similar to malic enzyme. | 0.511 |
Cgl0528 | Cgl0526 | cg0617 | cg0614 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | Hypothetical protein predicted by Glimmer/Critica. | 0.778 |
Cgl0528 | Cgl1140 | cg0617 | cg1291 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | Putative membrane protein. | 0.531 |
Cgl0528 | Cgl1437 | cg0617 | cg1625 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | Hypothetical protein predicted by Glimmer/Critica. | 0.534 |
Cgl0528 | Cgl1923 | cg0617 | cg2106 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | CONSERVED HYPOTHETICAL PROTEIN. | 0.485 |
Cgl0528 | adhE | cg0617 | cg0387 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | PUTATIVE ZINC-TYPE ALCOHOL DEHYDROGENASE TRANSMEMB. | 0.574 |
Cgl0528 | dkg | cg0617 | cg0612 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE. | 0.714 |
Cgl0528 | fdhD | cg0617 | cg0616 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | FORMATE DEHYDROGENASE CHAIN D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.997 |
Cgl0528 | fdhF | cg0617 | cg0618 | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | PUTATIVE FORMATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.988 |
Cgl1140 | Cgl0159 | cg1291 | cg0198 | Putative membrane protein. | Conserved hypothetical protein. | 0.598 |
Cgl1140 | Cgl0528 | cg1291 | cg0617 | Putative membrane protein. | PUTATIVE MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYN. | 0.531 |
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