Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0571 | Cgl0572 | cg0661 | cg0662 | Conserved HYPOTHETICAL PROTEIN. | FAD/FMN-containing dehydrogenase. | 0.784 |
Cgl0571 | Cgl2859 | cg0661 | cg3165 | Conserved HYPOTHETICAL PROTEIN. | Putative membrane protein. | 0.443 |
Cgl0571 | cma | cg0661 | cg0663 | Conserved HYPOTHETICAL PROTEIN. | CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTASE. | 0.504 |
Cgl0571 | pks | cg0661 | cg3178 | Conserved HYPOTHETICAL PROTEIN. | POLYKETIDE SYNTHASE. | 0.723 |
Cgl0572 | Cgl0571 | cg0662 | cg0661 | FAD/FMN-containing dehydrogenase. | Conserved HYPOTHETICAL PROTEIN. | 0.784 |
Cgl0572 | Cgl2443 | cg0662 | cg2684 | FAD/FMN-containing dehydrogenase. | Membrane protein DedA family. | 0.540 |
Cgl0572 | Cgl2859 | cg0662 | cg3165 | FAD/FMN-containing dehydrogenase. | Putative membrane protein. | 0.560 |
Cgl0572 | Cgl2862 | cg0662 | cg3168 | FAD/FMN-containing dehydrogenase. | SAM-dependent methyltransferase. | 0.531 |
Cgl0572 | Cgl2917 | cg0662 | cg3226 | FAD/FMN-containing dehydrogenase. | Permease of the major facilitator superfamily. | 0.637 |
Cgl0572 | cma | cg0662 | cg0663 | FAD/FMN-containing dehydrogenase. | CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTASE. | 0.911 |
Cgl0572 | dld | cg0662 | cg1027 | FAD/FMN-containing dehydrogenase. | D-LACTATE DEHYDROGENASE; Catalyzes the oxidation of D-lactate to pyruvate. Has also weak activity with L-lactate and DL-2-hydroxybutyrate. Electrons derived from D-lactate oxidation enter the electron transport chain. Essential for growth with D-lactate as sole carbon and energy source. | 0.707 |
Cgl0572 | lldA | cg0662 | cg3227 | FAD/FMN-containing dehydrogenase. | PUTATIVE L-LACTATE DEHYDROGENASE. | 0.545 |
Cgl0572 | pks | cg0662 | cg3178 | FAD/FMN-containing dehydrogenase. | POLYKETIDE SYNTHASE. | 0.510 |
Cgl0572 | pth2 | cg0662 | cg1067 | FAD/FMN-containing dehydrogenase. | PEPTIDYL-TRNA HYDROLASE; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.707 |
Cgl2443 | Cgl0572 | cg2684 | cg0662 | Membrane protein DedA family. | FAD/FMN-containing dehydrogenase. | 0.540 |
Cgl2859 | Cgl0571 | cg3165 | cg0661 | Putative membrane protein. | Conserved HYPOTHETICAL PROTEIN. | 0.443 |
Cgl2859 | Cgl0572 | cg3165 | cg0662 | Putative membrane protein. | FAD/FMN-containing dehydrogenase. | 0.560 |
Cgl2859 | Cgl2862 | cg3165 | cg3168 | Putative membrane protein. | SAM-dependent methyltransferase. | 0.933 |
Cgl2859 | pks | cg3165 | cg3178 | Putative membrane protein. | POLYKETIDE SYNTHASE. | 0.584 |
Cgl2862 | Cgl0572 | cg3168 | cg0662 | SAM-dependent methyltransferase. | FAD/FMN-containing dehydrogenase. | 0.531 |
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