STRINGSTRING
crtB2 crtB2 crtI2 crtI2 crtE crtE crtEb crtEb crtI crtI crtI-2 crtI-2 crtYf crtYf crtYe crtYe Cgl0625 Cgl0625 idi idi idsA idsA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtB2PHYTOENE SYNTHETASE. (304 aa)    
Predicted Functional Partners:
crtI2
PHYTOENE DEHYDROGENASE (DESATURASE).
 
 0.999
crtE
Geranylgeranyl-pyrophosphate sythase; Belongs to the FPP/GGPP synthase family.
 
 
 0.998
crtEb
LYCOPENE ELONGASE.
 
  
 0.995
crtI
PHYTOENE DESATURASE (C-terminal fragment).
 
 0.994
crtI-2
PHYTOENE DEHYDROGENASE (DESATURASE) (N-terminal fragment).
 
 0.992
crtYf
C50 CAROTENOID EPSILON CYCLASE.
 
  
 0.989
crtYe
C50 CAROTENOID EPSILON CYCLASE.
 
  
 0.985
Cgl0625
Drug exporter, RND superfamily.
  
  
 0.939
idi
ISOPENTENYLDIPHOSPHATE ISOMERASE; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.904
idsA
PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE; Belongs to the FPP/GGPP synthase family.
  
 
 0.892
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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