STRINGSTRING
Cgl0625 Cgl0625 crtYf crtYf crtI2 crtI2 crtYe crtYe crtB2 crtB2 crtE crtE crtEb crtEb Cgl0627 Cgl0627 crtB crtB Cgl0631 Cgl0631 idsA idsA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0625Drug exporter, RND superfamily. (730 aa)    
Predicted Functional Partners:
crtYf
C50 CAROTENOID EPSILON CYCLASE.
  
  
 0.985
crtI2
PHYTOENE DEHYDROGENASE (DESATURASE).
  
  
 0.959
crtYe
C50 CAROTENOID EPSILON CYCLASE.
  
  
 0.958
crtB2
PHYTOENE SYNTHETASE.
  
  
 0.939
crtE
Geranylgeranyl-pyrophosphate sythase; Belongs to the FPP/GGPP synthase family.
  
  
 0.937
crtEb
LYCOPENE ELONGASE.
  
  
 0.936
Cgl0627
Transcriptional regulator, MarR family.
 
  
 0.739
crtB
PHYTOENE SYNTHETASE.
  
  
 0.721
Cgl0631
Glycosyl transferase.
    
 
 0.714
idsA
PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE; Belongs to the FPP/GGPP synthase family.
  
  
 0.698
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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