STRINGSTRING
crtE crtE idi idi crtB2 crtB2 crtB crtB crtYe crtYe crtEb crtEb crtI crtI crtYf crtYf crtI-2 crtI-2 lytB lytB crtI2 crtI2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
crtEGeranylgeranyl-pyrophosphate sythase; Belongs to the FPP/GGPP synthase family. (372 aa)    
Predicted Functional Partners:
idi
ISOPENTENYLDIPHOSPHATE ISOMERASE; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 
 0.999
crtB2
PHYTOENE SYNTHETASE.
 
 
 0.998
crtB
PHYTOENE SYNTHETASE.
 
 
 0.994
crtYe
C50 CAROTENOID EPSILON CYCLASE.
 
  
 0.993
crtEb
LYCOPENE ELONGASE.
 
  
 0.992
crtI
PHYTOENE DESATURASE (C-terminal fragment).
 
  
 0.992
crtYf
C50 CAROTENOID EPSILON CYCLASE.
 
  
 0.989
crtI-2
PHYTOENE DEHYDROGENASE (DESATURASE) (N-terminal fragment).
 
  
 0.989
lytB
Penicillin tolerance protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
  
 
 0.981
crtI2
PHYTOENE DEHYDROGENASE (DESATURASE).
 
  
 0.972
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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