STRINGSTRING
Cgl0628 Cgl0628 crtB2 crtB2 mptA mptA idsA idsA crtYf crtYf crtYe crtYe Cgl0629 Cgl0629 Cgl0007 Cgl0007 Cgl2031 Cgl2031 crtB crtB cop1 cop1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl0628Secreted lipoprotein; Belongs to the calycin superfamily. Lipocalin family. (216 aa)    
Predicted Functional Partners:
crtB2
PHYTOENE SYNTHETASE.
  
 
 0.663
mptA
Putative membrane protein; Involved in the latter stages of the biosynthesis of the alpha-(1->6) mannan core of lipomannan (LM). Catalyzes the addition of alpha-(1->6)-mannose residue.
   
  
 0.611
idsA
PUTATIVE GERANYLGERANYL PYROPHOSPHATE SYNTHASE; Belongs to the FPP/GGPP synthase family.
      
 0.609
crtYf
C50 CAROTENOID EPSILON CYCLASE.
      
 0.606
crtYe
C50 CAROTENOID EPSILON CYCLASE.
   
  
 0.568
Cgl0629
Nucleoside-diphosphate-sugar epimerase.
       0.566
Cgl0007
HYPOTHETICAL PROTEIN.
  
    0.538
Cgl2031
Predicted endonuclease; Belongs to the UPF0102 family.
      
 0.454
crtB
PHYTOENE SYNTHETASE.
 
 
 
 0.453
cop1
Trehalose corynomycolyl transferase; One of the two major secreted proteins.
  
     0.441
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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